Miyakogusa Predicted Gene
- Lj0g3v0173139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0173139.1 tr|G7I2L6|G7I2L6_MEDTR Pre-mRNA-processing factor
OS=Medicago truncatula GN=MTR_1g072740 PE=4 SV=1,86.95,0,seg,NULL;
WD_REPEATS_1,WD40 repeat, conserved site; PRE-MRNA SPLICING FACTOR
PRP17,NULL; FAMILY NOT ,CUFF.10878.1
(1755 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62194 similar to UniRef100_Q9XIJ3 Cluster: T10O24.21;... 1225 0.0
gnl|LJGI|TC65870 homologue to UniRef100_A7Q2C3 Cluster: Chromoso... 686 0.0
>gnl|LJGI|TC62194 similar to UniRef100_Q9XIJ3 Cluster: T10O24.21; n=1; Arabidopsis
thaliana|Rep: T10O24.21 - Arabidopsis thaliana
(Mouse-ear cress), partial (25%)
Length = 827
Score = 1225 bits (618), Expect = 0.0
Identities = 618/618 (100%)
Strand = Plus / Plus
Query: 130 aaggtagacgacaccatgctggccctcaccgtcgccgacaagaaaaccctctccaaaccc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aaggtagacgacaccatgctggccctcaccgtcgccgacaagaaaaccctctccaaaccc 269
Query: 190 atcgaccctacccagcacgccatcgccttcaaccctacctacgaccagctctgggcaccc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atcgaccctacccagcacgccatcgccttcaaccctacctacgaccagctctgggcaccc 329
Query: 250 atccagggccctgcccatccctacgccaaggatggcatcgcacaaggcatgcgcaaccac 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atccagggccctgcccatccctacgccaaggatggcatcgcacaaggcatgcgcaaccac 389
Query: 310 aagctcggcttcgtcgaagacgcctccgttgaacccttcctattcgatgaacagtacaac 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aagctcggcttcgtcgaagacgcctccgttgaacccttcctattcgatgaacagtacaac 449
Query: 370 acctttcacaagttcggctacgctgcggatccgtctgcttccaattatgttggtgatctc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acctttcacaagttcggctacgctgcggatccgtctgcttccaattatgttggtgatctc 509
Query: 430 gacgcgcttaaccggaacaatgcggcgtctgtctacaacatcccccaccgcgagcagaag 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gacgcgcttaaccggaacaatgcggcgtctgtctacaacatcccccaccgcgagcagaag 569
Query: 490 aagcggaggatcgaggccaaaaagaataaggaagaaggagatagtgacaatgagggtgat 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aagcggaggatcgaggccaaaaagaataaggaagaaggagatagtgacaatgagggtgat 629
Query: 550 ggtgagggcggagagattgaaaacccggctaccgatgcgtggttgttgaagaataagaag 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggtgagggcggagagattgaaaacccggctaccgatgcgtggttgttgaagaataagaag 689
Query: 610 agcccttgggcggggaagaaggaagggttgcagggtgagctgacggaggatcagaagaag 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 agcccttgggcggggaagaaggaagggttgcagggtgagctgacggaggatcagaagaag 749
Query: 670 tacgcggaagagtatgcgaagaagaaagaggacgagaagagtgggtttggaggggagaag 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tacgcggaagagtatgcgaagaagaaagaggacgagaagagtgggtttggaggggagaag 809
Query: 730 gctgaggttgttaaggat 747
||||||||||||||||||
Sbjct: 810 gctgaggttgttaaggat 827
Score = 172 bits (87), Expect = 5e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 atggatctcatcaaccaatactcagatgaccaaaacgacgacgacccaaaccctaacccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggatctcatcaaccaatactcagatgaccaaaacgacgacgacccaaaccctaacccg 140
Query: 61 ccggaggcggctgagaaggagggagat 87
|||||||||||||||||||||||||||
Sbjct: 141 ccggaggcggctgagaaggagggagat 167
>gnl|LJGI|TC65870 homologue to UniRef100_A7Q2C3 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 816
Score = 686 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus
Query: 1410 gccgtccataacgcttcacccgaatgccaattggctcgctgcgcagagcttggataacca 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgtccataacgcttcacccgaatgccaattggctcgctgcgcagagcttggataacca 60
Query: 1470 gatacttatttatagcaccagggagaagttccagcttaacaaaaagaagagttttcgtgg 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatacttatttatagcaccagggagaagttccagcttaacaaaaagaagagttttcgtgg 120
Query: 1530 acatgtcactggtcatgcctgtcaggtcaatttttcgcccgatggacgctttgtcatgtc 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acatgtcactggtcatgcctgtcaggtcaatttttcgcccgatggacgctttgtcatgtc 180
Query: 1590 aggtgatggtgatggtaagtgttggttctgggattggaagagttgcaaagtcttcagaac 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtgatggtgatggtaagtgttggttctgggattggaagagttgcaaagtcttcagaac 240
Query: 1650 tctcaagtgtcacgaaggtgtttgcattggttgtgaatggcatccccttgaacagagcaa 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctcaagtgtcacgaaggtgtttgcattggttgtgaatggcatccccttgaacagagcaa 300
Query: 1710 ggttgcaacatgcggctgggatggattgataaagtactgggactag 1755
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttgcaacatgcggctgggatggattgataaagtactgggactag 346