Miyakogusa Predicted Gene

Lj0g3v0173029.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0173029.1 tr|B4JUY7|B4JUY7_DROGR GH14780 OS=Drosophila
grimshawi GN=GH14780 PE=4 SV=1,33.85,8.7,seg,NULL,CUFF.10865.1
         (327 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW602398 similar to UniRef100_Q9FG11 Cluster: Genomic D...   119   1e-26
gnl|LJGI|TC61718 similar to UniRef100_A7P0J7 Cluster: Chromosome...    90   1e-17

>gnl|LJGI|BW602398 similar to UniRef100_Q9FG11 Cluster: Genomic DNA, chromosome 5, BAC
           clone:F15M7; n=1; Arabidopsis thaliana|Rep: Genomic DNA,
           chromosome 5, BAC clone:F15M7 - Arabidopsis thaliana
           (Mouse-ear cress), partial (27%)
          Length = 463

 Score =  119 bits (60), Expect = 1e-26
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                       
Query: 59  gattctgcgtcttccacgttcgtacaatgcctcaaccgccgtgtatccaccgcaagcacc 118
           ||||| |||||||| || ||||| ||||||||||||||||| ||||| || |||| ||||
Sbjct: 177 gattccgcgtcttcaaccttcgtgcaatgcctcaaccgccgcgtatcgacggcaaccacc 236

                                           
Query: 119 gacctcgacctgctcgattccatgtcgttcgg 150
           ||||||||||||||||||||||||||||||||
Sbjct: 237 gacctcgacctgctcgattccatgtcgttcgg 268


>gnl|LJGI|TC61718 similar to UniRef100_A7P0J7 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 738

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 54/57 (94%)
 Strand = Plus / Plus

                                                                    
Query: 251 ccaaccctttctccatcatcatagttcttctcccttcaaagtttcagcttcttcttc 307
           |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 233 ccaaccctttatccatcatcacagttcttctccctttaaagtttcagcttcttcttc 289