Miyakogusa Predicted Gene
- Lj0g3v0172469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0172469.1 Non Chatacterized Hit- tr|D7M0D1|D7M0D1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.99,9e-18,coiled-coil,NULL; seg,NULL; TARGETING PROTEIN FOR
XKLP2,NULL; TPX2_importin,Cell cycle regulated mic,CUFF.10841.1
(1029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS354635 similar to UniRef100_A7PJ72 Cluster: Chromosom... 1524 0.0
gnl|LJGI|GO037019 similar to UniRef100_A7PJ72 Cluster: Chromosom... 216 2e-55
gnl|LJGI|FS321746 weakly similar to UniRef100_A7PJ72 Cluster: Ch... 214 8e-55
gnl|LJGI|TC71640 similar to UniRef100_A7PJ72 Cluster: Chromosome... 163 3e-39
>gnl|LJGI|FS354635 similar to UniRef100_A7PJ72 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 773
Score = 1524 bits (769), Expect = 0.0
Identities = 772/773 (99%)
Strand = Plus / Minus
Query: 78 gccaagaagtacaccacatccaccagaatttaaggaatttcatctggaaaccttggctag 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gccaagaagtacaccacatccaccagaatttaaggaatttcatctggaaaccttggctag 714
Query: 138 ggctcatcagagtgcagattcagcttcaatagcttcaactgaggtgtctcacaaggagaa 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggctcatcagagtgcagattcagcttcaatagcttcaactgaggtgtctcacaaggagaa 654
Query: 198 ttcatggaagcctcatcttactgaacctaaaacaccagtactgcaaacctcactaagggc 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ttcatggaagcctcatcttactgaacctaaaacaccagtactgcaaacctcactaagggc 594
Query: 258 ccgcccaccaaagatcaaaagctcattcgaattagagcaagaggagcttgaaaagatccc 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccgcccaccaaagatcaaaagctcattcgaattagagcaagaggagcttgaaaagatccc 534
Query: 318 taaattcaaggcaagacctctaaataagaagatctttgaaagtaaaggggatattggaat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 taaattcaaggcaagacctctaaataagaagatctttgaaagtaaaggggatattggaat 474
Query: 378 attctgccacacaaagaaacatgttacagaacctcaagagtttcactttgcaacaaatga 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 attctgccacacaaagaaacatgttacagaacctcaagagtttcactttgcaacaaatga 414
Query: 438 gaggattccgccgcctgctgccatagccgatttatttgacaagctttgtttgaagtctga 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaggattccgccgcctgctgccatagccgatttatttgacaagctttgtttgaagtctga 354
Query: 498 aggtgcacataaccacaacccaattccaagaaaaacaactccaaatccatttcacctcca 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aggtgcacataaccacaacccaattccaagaaaaacaactccaaatccatttcacctcca 294
Query: 558 caccgaggaaagaggcgctgagaaagagaagaaactgttcatggaacttctgcagaaaca 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caccgaggaaagaggcgctgagaaagagaagaaactgttcatggaacttctgcagaaaca 234
Query: 618 gttggaagaggaagccgcaagggttcccaaggctaatccatacccctataccaccgactt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gttggaagaggaagccgcaagggttcccaaggctaatccatacccctataccaccgactt 174
Query: 678 cgctgtgatcccaccaaaaccagaacccaagcattgcacaaaacctgagccattccaatt 737
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ccctgtgatcccaccaaaaccagaacccaagcattgcacaaaacctgagccattccaatt 114
Query: 738 ggagagcctagtgagacatgaggaagaaatgcaaagggaacttgaagaaagacttagaat 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ggagagcctagtgagacatgaggaagaaatgcaaagggaacttgaagaaagacttagaat 54
Query: 798 ggaaagagaagaggcccagttgagagagtttaaggcacagccagtcttaaaag 850
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ggaaagagaagaggcccagttgagagagtttaaggcacagccagtcttaaaag 1
>gnl|LJGI|GO037019 similar to UniRef100_A7PJ72 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 657
Score = 216 bits (109), Expect = 2e-55
Identities = 152/165 (92%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 433 aatgagaggattccgccgcctgctgccatagccgatttatttgacaagctttgtttgaag 492
||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 40 aatgagaggattctgccgc-tgctgccatagccgatttatttgataagctttgtttgaag 98
Query: 493 tctgaaggtgcacataaccacaacccaattccaagaaaaacaactccaaatccatttcac 552
||| || | | |||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 99 tctaaacctacccataactagaacccaattccaagaaaaacaactccaaattcatttcac 158
Query: 553 ctccacaccgaggaaagaggcgctgagaaagagaagaaactgttc 597
|||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 159 ctccacacagaggaaagaggcgctgagaaagagaagaaattgttc 203
>gnl|LJGI|FS321746 weakly similar to UniRef100_A7PJ72 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 725
Score = 214 bits (108), Expect = 8e-55
Identities = 151/164 (92%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 434 atgagaggattccgccgcctgctgccatagccgatttatttgacaagctttgtttgaagt 493
|||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 atgagaggattctgccgc-tgctgccatagccgatttatttgataagctttgtttgaagt 59
Query: 494 ctgaaggtgcacataaccacaacccaattccaagaaaaacaactccaaatccatttcacc 553
|| || | | |||||| | |||||||||||||||||||||||||||||| |||||||||
Sbjct: 60 ctaaacctacccataactagaacccaattccaagaaaaacaactccaaattcatttcacc 119
Query: 554 tccacaccgaggaaagaggcgctgagaaagagaagaaactgttc 597
||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 120 tccacacagaggaaagaggcgctgagaaagagaagaaattgttc 163
>gnl|LJGI|TC71640 similar to UniRef100_A7PJ72 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 659
Score = 163 bits (82), Expect = 3e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 939 tagagcacaatttgatgagaagattaaggagaaagaaactatgtacaaacgatacagaga 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tagagcacaatttgatgagaagattaaggagaaagaaactatgtacaaacgatacagaga 61
Query: 999 ggagagtgaagcagaaagaatg 1020
||||||||||||||||||||||
Sbjct: 62 ggagagtgaagcagaaagaatg 83