Miyakogusa Predicted Gene
- Lj0g3v0171439.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0171439.1 Non Chatacterized Hit- tr|I1NH37|I1NH37_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.14,0,60S RIBOSOMAL
PROTEIN L3-RELATED,NULL; seg,NULL; no description,NULL;
Ribosomal_L3,Ribosomal protein,CUFF.11615.1
(861 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58792 homologue to UniRef100_Q6TKR0 Cluster: Ribosoma... 1604 0.0
gnl|LJGI|TC57222 homologue to UniRef100_Q9SBR8 Cluster: L3 Ribos... 1453 0.0
gnl|LJGI|TC79695 similar to UniRef100_Q2VCJ2 Cluster: Ribosomal ... 1080 0.0
gnl|LJGI|AV407293 homologue to UniRef100_Q9SBR8 Cluster: L3 Ribo... 636 0.0
gnl|LJGI|TC70013 similar to UniRef100_Q6SKP4 Cluster: Ribosomal ... 337 7e-92
>gnl|LJGI|TC58792 homologue to UniRef100_Q6TKR0 Cluster: Ribosomal protein L3A; n=1;
Nicotiana tabacum|Rep: Ribosomal protein L3A - Nicotiana
tabacum (Common tobacco), complete
Length = 1532
Score = 1604 bits (809), Expect = 0.0
Identities = 827/833 (99%)
Strand = Plus / Plus
Query: 1 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 122
Query: 61 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 182
Query: 121 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 242
Query: 181 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 302
Query: 241 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 362
Query: 301 acattgaacactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acattgaacactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 422
Query: 361 aactggtgcaagtccaagaagaaggctttctccaagtactccaagcagtttgagtctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aactggtgcaagtccaagaagaaggctttctccaagtactccaagcagtttgagtctgaa 482
Query: 421 gaagggaagaaaaatgttcaggcacagttggagaaaattaagaagtatgcaactgttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gaagggaagaaaaatgttcaggcacagttggagaaaattaagaagtatgcaactgttgtc 542
Query: 481 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 602
Query: 541 atcatggaaattcaggtcaatggtgggactgtggcacagaaggtggactttgcttacagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atcatggaaattcaggtcaatggtgggactgtggcacagaaggtggactttgcttacagt 662
Query: 601 ttcttcgagaaacaggttcctattgatgctgtgttccagaaggatgagatgattgacatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttcttcgagaaacaggttcctattgatgctgtgttccagaaggatgagatgattgacatc 722
Query: 661 attggggtgaccaaaggtaagggttatgagggtgttgtgacccgttggggtgttacccgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 attggggtgaccaaaggtaagggttatgagggtgttgtgacccgttggggtgttacccgt 782
Query: 721 cttcctcgcaagactcacaggggtttgaggaaggttgcttgtattggtgcatggcatcca 780
||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 783 cttcctcgcaagactcacaggggtttgaggaaggtggcctgtattggtgcctggcatcca 842
Query: 781 gcaagagtttctttcactgttgccagggctggtcaaaatggataccatcaccg 833
|| |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 843 gctagagtttctttcactgttgccagggctggtcagaatggataccaccaccg 895
>gnl|LJGI|TC57222 homologue to UniRef100_Q9SBR8 Cluster: L3 Ribosomal protein; n=1;
Medicago sativa subsp. x varia|Rep: L3 Ribosomal protein
- Medicago varia (Alfalfa), complete
Length = 1438
Score = 1453 bits (733), Expect = 0.0
Identities = 808/833 (96%)
Strand = Plus / Plus
Query: 1 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 60
|||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||
Sbjct: 68 atgtctcacaggaagttcgaacaccccaggcacgggtcactgggatttctccccaggaag 127
Query: 61 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 120
|||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 128 cgtgctgctcgtcacagaggaaaagtgaagtcattccctaaggatgacccttccaaatca 187
Query: 121 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 188 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgttagagaggtc 247
Query: 181 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 248 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaattatcgag 307
Query: 241 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 308 acccctccaatggttattgttggtgttgtgggctatgtgaaaactcctcgtggtatgcga 367
Query: 301 acattgaacactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 acattgaaaactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 427
Query: 361 aactggtgcaagtccaagaagaaggctttctccaagtactccaagcagtttgagtctgaa 420
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 428 aactggtgcaagtccaagaagaaggctttcaccaagtactccaagcagtttgagtccgaa 487
Query: 421 gaagggaagaaaaatgttcaggcacagttggagaaaattaagaagtatgcaactgttgtc 480
|||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 488 gaagggaagaaaaacgttcaggcccagctggagaaaattaagaagtatgcaactgttgtc 547
Query: 481 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 607
Query: 541 atcatggaaattcaggtcaatggtgggactgtggcacagaaggtggactttgcttacagt 600
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 608 atcatggaaattcaggtcaatggcggcactgtggcacagaaggtggactttgcttacagt 667
Query: 601 ttcttcgagaaacaggttcctattgatgctgtgttccagaaggatgagatgattgacatc 660
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttctttgagaaacaggttccaattgatgctgtgttccagaaggatgagatgattgacatc 727
Query: 661 attggggtgaccaaaggtaagggttatgagggtgttgtgacccgttggggtgttacccgt 720
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 attggagtgactaaaggtaagggttatgagggtgttgtgacccgttggggtgttacccgt 787
Query: 721 cttcctcgcaagactcacaggggtttgaggaaggttgcttgtattggtgcatggcatcca 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 788 cttcctcgcaagactcacaggggtttgaggaaggttgcttgtattggtgcctggcatcca 847
Query: 781 gcaagagtttctttcactgttgccagggctggtcaaaatggataccatcaccg 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gcaagagtttctttcactgttgccagggctggtcaaaatggataccatcaccg 900
>gnl|LJGI|TC79695 similar to UniRef100_Q2VCJ2 Cluster: Ribosomal protein L3-like;
n=1; Solanum tuberosum|Rep: Ribosomal protein L3-like -
Solanum tuberosum (Potato), partial (90%)
Length = 1387
Score = 1080 bits (545), Expect = 0.0
Identities = 545/545 (100%)
Strand = Plus / Plus
Query: 1 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 123
Query: 61 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 183
Query: 121 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 243
Query: 181 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 303
Query: 241 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 363
Query: 301 acattgaacactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acattgaacactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 423
Query: 361 aactggtgcaagtccaagaagaaggctttctccaagtactccaagcagtttgagtctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aactggtgcaagtccaagaagaaggctttctccaagtactccaagcagtttgagtctgaa 483
Query: 421 gaagggaagaaaaatgttcaggcacagttggagaaaattaagaagtatgcaactgttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaagggaagaaaaatgttcaggcacagttggagaaaattaagaagtatgcaactgttgtc 543
Query: 481 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 603
Query: 541 atcat 545
|||||
Sbjct: 604 atcat 608
Score = 353 bits (178), Expect = 1e-96
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 656 acatcattggggtgaccaaaggtaagggttatgagggtgttgtgacccgttggggtgtta 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 acatcattggggtgaccaaaggtaagggttatgagggtgttgtgacccgttggggtgtta 661
Query: 716 cccgtcttcctcgcaagactcacaggggtttgaggaaggttgcttgtattggtgcatggc 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cccgtcttcctcgcaagactcacaggggtttgaggaaggttgcttgtattggtgcatggc 721
Query: 776 atccagcaagagtttctttcactgttgccagggctggtcaaaatggataccatcaccg 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atccagcaagagtttctttcactgttgccagggctggtcaaaatggataccatcaccg 779
>gnl|LJGI|AV407293 homologue to UniRef100_Q9SBR8 Cluster: L3 Ribosomal protein; n=1;
Medicago sativa subsp. x varia|Rep: L3 Ribosomal protein
- Medicago varia (Alfalfa), partial (27%)
Length = 428
Score = 636 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus
Query: 1 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 167
Query: 61 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 227
Query: 121 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 287
Query: 181 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 347
Query: 241 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 407
Query: 301 acattgaacactgtttgggct 321
|||||||||||||||||||||
Sbjct: 408 acattgaacactgtttgggct 428
>gnl|LJGI|TC70013 similar to UniRef100_Q6SKP4 Cluster: Ribosomal protein L3; n=1;
Solanum lycopersicum|Rep: Ribosomal protein L3 - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum),
complete
Length = 1459
Score = 337 bits (170), Expect = 7e-92
Identities = 665/830 (80%)
Strand = Plus / Plus
Query: 1 atgtctcacaggaagttcgagcaccccagacatgggtcactgggatttctccctaggaag 60
||||||||| ||||||||||||||||||| || || || || ||||||||||| |||||
Sbjct: 51 atgtctcaccggaagttcgagcaccccaggcacggttcccttggatttctcccaaggaaa 110
Query: 61 cgtgctgcacgtcacaggggaaaagtgaagtcattccctaaggatgacccatccaagtca 120
|| ||| | ||||| | |||||||||||||| ||||| || ||||| || |||| ||
Sbjct: 111 cgagcttctcgtcaacgtggaaaagtgaagtctttcccaaaagatgatcctagcaagcca 170
Query: 121 cccaagcttactgccttcttgggttacaaggctggtatgactcacattgtcagagaggtc 180
|| | |||||||| ||||| |||| |||||| ||||| ||||| || ||||||||
Sbjct: 171 tgcagattgactgcctttttgggctacatggctgggatgacccacatcgttagagaggtt 230
Query: 181 gagaagccaggatcaaagcttcacaagaaggagacttgcgagccagttacaatcattgag 240
||||| || |||||||| ||||| ||||| ||||| || || | ||||| ||||||||
Sbjct: 231 gagaaacctggatcaaaacttcataagaaagagacatgtgaagctgttactatcattgaa 290
Query: 241 acccctccaatggttattgttggtgttgtgggctatgtgaaaactccccgtggtatgcga 300
|| |||||| ||||| ||||||| |||||||| |||||||| || || || ||| | ||
Sbjct: 291 actcctccattggttgttgttggagttgtgggttatgtgaagacccctcgcggtcttcgc 350
Query: 301 acattgaacactgtttgggctcagcatttgagtgaggaagtgaagcgtaggttctataag 360
||| |||| |||||||||||||||||||| |||||||| || ||| | | ||||| ||
Sbjct: 351 acactgaatactgtttgggctcagcatttaagtgaggatgttaagagacgattctacaaa 410
Query: 361 aactggtgcaagtccaagaagaaggctttctccaagtactccaagcagtttgagtctgaa 420
||||||||||| || || |||||||| || |||| || || ||| | ||||| ||||
Sbjct: 411 aactggtgcaaatctaaaaagaaggcgtttaccaaatattcaaagaaatttgaaactgag 470
Query: 421 gaagggaagaaaaatgttcaggcacagttggagaaaattaagaagtatgcaactgttgtc 480
||||| |||||| ||||||| | ||| | ||||| || || |||||| ||||| | |
Sbjct: 471 gaaggaaagaaagatgttcaatctcagcttgagaagatgaaaaagtattcaactatcatt 530
Query: 481 cgtgtgttggctcacactcagatcagaaaaatgaaagggttgaagcagaagaaagcccac 540
||||| ||||||| |||||||| || || |||| || | || |||||||| || ||
Sbjct: 531 cgtgttctggctcatactcagataaggaagttgaatggtcttaaacagaagaaggcacat 590
Query: 541 atcatggaaattcaggtcaatggtgggactgtggcacagaaggtggactttgcttacagt 600
| ||||| || || || ||||||||||| ||| |||||||| |||| ||| |||||
Sbjct: 591 ttgatggagatccaagttaatggtgggacagtgagccagaaggttgactatgcatacagc 650
Query: 601 ttcttcgagaaacaggttcctattgatgctgtgttccagaaggatgagatgattgacatc 660
||||||||||| || | ||| | ||| |||| |||||||| ||||||||||| || |||
Sbjct: 651 ttcttcgagaagcaaatccctgtggatactgttttccagaaagatgagatgatagatatc 710
Query: 661 attggggtgaccaaaggtaagggttatgagggtgttgtgacccgttggggtgttacccgt 720
||||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| || ||
Sbjct: 711 attggtgtgaccaagggtaaaggttacgaaggtgttgtgactcgttggggtgtcactcgc 770
Query: 721 cttcctcgcaagactcacaggggtttgaggaaggttgcttgtattggtgcatggcatcca 780
||||| |||||||| ||||||||| | |||||||| || ||||||||||| ||||| ||
Sbjct: 771 cttccccgcaagacacacaggggtctaaggaaggtcgcatgtattggtgcttggcaccct 830
Query: 781 gcaagagtttctttcactgttgccagggctggtcaaaatggataccatca 830
|| | || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 831 gctcgtgtctccttcacagttgccagggctggtcaaaatggatatcatca 880