Miyakogusa Predicted Gene

Lj0g3v0171149.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0171149.1 Non Chatacterized Hit- tr|I1HNA4|I1HNA4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.10750.1
         (1638 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72338 similar to UniRef100_A7QJU9 Cluster: Chromosome...   934   0.0  

>gnl|LJGI|TC72338 similar to UniRef100_A7QJU9 Cluster: Chromosome undetermined
            scaffold_108, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_108, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (58%)
          Length = 488

 Score =  934 bits (471), Expect = 0.0
 Identities = 484/487 (99%), Gaps = 1/487 (0%)
 Strand = Plus / Plus

                                                                        
Query: 970  gcttcctctgtttctgaagatggccctggaattgagaattttcaaatttgtggtgaggct 1029
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    gcttcctctgtttctgaagatggccctggaattgagaattttcaaatttgtggtgaggct 61

                                                                        
Query: 1030 attcctggagaaaaacttcttggatgtggttatccagtccgtggaacttctctttgtatg 1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   attcctggagaaaaacttcttggatgtggttatccagtccgtggaacttctctttgtatg 121

                                                                        
Query: 1090 tttcagtgggttcggcatcttcaggatggcactaggc-agtatattgaaggagccacaaa 1148
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122  tttcagtgggttcggcatcttcaggatggcactaggcgagtatattgaaggagccacaaa 181

                                                                        
Query: 1149 tccagagtatgtagttacagccgatgatgttgataagttgatagcagttgagtgtattcc 1208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  tccagagtatgtagttacagccgatgatgttgataagttgatagcagttgagtgtattcc 241

                                                                        
Query: 1209 aatggatgacaaaggccatcagggggagctagtgaggctttttgctaatgatcagaacaa 1268
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 242  aatggatgacaaaggccatcaaggggagctagtgaggctttttgctaatgatcacaacaa 301

                                                                        
Query: 1269 aataaaatgtgacccagaaatgcaacttgagattgacacaaatctggctaaaggagaagc 1328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  aataaaatgtgacccagaaatgcaacttgagattgacacaaatctggctaaaggagaagc 361

                                                                        
Query: 1329 aacgttcagtgttctacttctgatggattcttctgaaaattgggaacaagcaactctatt 1388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  aacgttcagtgttctacttctgatggattcttctgaaaattgggaacaagcaactctatt 421

                                                                        
Query: 1389 cttaagacgatcaggataccaaattaaaataagtggtactgaaggtccagtagttgctga 1448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  cttaagacgatcaggataccaaattaaaataagtggtactgaaggtccagtagttgctga 481

                   
Query: 1449 gaaattc 1455
            |||||||
Sbjct: 482  gaaattc 488