Miyakogusa Predicted Gene
- Lj0g3v0170909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0170909.1 Non Chatacterized Hit- tr|Q0WSP7|Q0WSP7_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,53.49,0.025,seg,NULL,CUFF.10718.1
(514 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromoso... 96 3e-19
gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-doma... 88 6e-17
gnl|LJGI|TC68920 homologue to UniRef100_A7QKD8 Cluster: Chromoso... 60 1e-08
gnl|LJGI|TC68665 homologue to UniRef100_A7PY71 Cluster: Chromoso... 52 3e-06
>gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 811
Score = 95.6 bits (48), Expect = 3e-19
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 221 ccgacatggaggagccagagctacggagcgagatgttgagcgaggtgaagttcgccggga 280
|||||||||||||||| ||||| ||||| ||||||||||||||||||||||| || || |
Sbjct: 577 ccgacatggaggagccggagctgcggagtgagatgttgagcgaggtgaagttggcaggaa 518
Query: 281 ttgttcccgttccggtggcggcgatgac 308
| || || || |||||||||||||||||
Sbjct: 517 tggtcccagtcccggtggcggcgatgac 490
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 377 ggcattcggatacgcctgccgcggccctccaccttggtgtggcggtccttggtggaggtc 436
||||| ||||| || | ||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 389 ggcatgcggatccggcggccgcggccgtccaccttggtgtggcggtccttggtggaggcc 330
Query: 437 cgctt 441
|||||
Sbjct: 329 cgctt 325
>gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-domain protein; n=1;
Antirrhinum majus subsp. majus|Rep: TCP-domain protein -
Antirrhinum majus subsp. majus, partial (30%)
Length = 607
Score = 87.7 bits (44), Expect = 6e-17
Identities = 110/132 (83%)
Strand = Plus / Minus
Query: 325 cttgtggccgagctcgcgggggagttggaaaactctagcggcgcagagggccggcattcg 384
||||||||||||||| |||| ||| ||||| || || || ||||||||||||||||| ||
Sbjct: 475 cttgtggccgagctcccgggtgagctggaagaccctggcagcgcagagggccggcatacg 416
Query: 385 gatacgcctgccgcggccctccaccttggtgtggcggtccttggtggaggtccgcttcgg 444
||| || | ||||||||| || ||||| ||||| ||||| ||||||| || | ||| ||
Sbjct: 415 gatgcggcggccgcggccgtctacctttgtgtgccggtctttggtggtggctctcttggg 356
Query: 445 cggaggtttttt 456
|||||| |||||
Sbjct: 355 cggaggcttttt 344
>gnl|LJGI|TC68920 homologue to UniRef100_A7QKD8 Cluster: Chromosome chr2
scaffold_112, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_112, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 778
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 398 cggccctccaccttggtgtggcggtccttggtggaggtccgcttcg 443
||||||||||||||||||||||||||||| || |||| |||||||
Sbjct: 382 cggccctccaccttggtgtggcggtccttcgtagaggaacgcttcg 337
>gnl|LJGI|TC68665 homologue to UniRef100_A7PY71 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 601
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 401 ccctccaccttggtgtggcggtccttggtggagg 434
|||||||| |||||||| ||||||||||||||||
Sbjct: 244 ccctccactttggtgtgacggtccttggtggagg 211