Miyakogusa Predicted Gene

Lj0g3v0170499.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0170499.1 tr|I0GJA9|I0GJA9_CALEA Oxidoreductase
molybdopterin-binding subunit OS=Caldisericum exile (strain
DS,31.43,1.8,seg,NULL,gene.g13085.t1.1
         (220 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63277                                                      103   4e-22
gnl|LJGI|TC62243 similar to UniRef100_A7Q420 Cluster: Chromosome...    54   4e-07

>gnl|LJGI|TC63277 
          Length = 824

 Score =  103 bits (52), Expect = 4e-22
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                       
Query: 36  gatcgatgatggtggcggtggtcatcgacatctcggtgactccgatggtggcgttgagtg 95
           ||||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||||
Sbjct: 263 gatcgatgatggtggtggtggtgatcggcatctcggtggctccgatggtggcgttgagtg 204

                   
Query: 96  tcgatctc 103
           ||||||||
Sbjct: 203 tcgatctc 196


>gnl|LJGI|TC62243 similar to UniRef100_A7Q420 Cluster: Chromosome chr13 scaffold_48,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_48, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 794

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 42  tgatggtggcggtggtcatcgacatctcggtgactccgatggtggcg 88
           ||||| |||||||||||||||  ||| ||||| ||||||||||||||
Sbjct: 133 tgatgatggcggtggtcatcggaatcgcggtggctccgatggtggcg 87