Miyakogusa Predicted Gene
- Lj0g3v0170279.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0170279.1 tr|G7LD46|G7LD46_MEDTR Ring finger protein
OS=Medicago truncatula GN=MTR_8g092990 PE=4
SV=1,37.01,0.0000000000002,no description,Zinc finger,
RING/FYVE/PHD-type; ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY
PROTEIN,,CUFF.10685.1
(513 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79521 similar to UniRef100_A7PKU8 Cluster: Chromosome... 658 0.0
gnl|LJGI|TC73772 similar to UniRef100_A7PKU8 Cluster: Chromosome... 84 1e-15
gnl|LJGI|TC82117 similar to UniRef100_A7QPF3 Cluster: Chromosome... 72 4e-12
gnl|LJGI|TC61878 similar to UniRef100_A7PKU8 Cluster: Chromosome... 72 4e-12
>gnl|LJGI|TC79521 similar to UniRef100_A7PKU8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 607
Score = 658 bits (332), Expect = 0.0
Identities = 335/336 (99%)
Strand = Plus / Plus
Query: 1 atgactcgcacgcttagaatcctccaagcctcaaacgacgccgtttcggcaccgccgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgactcgcacgcttagaatcctccaagcctcaaacgacgccgtttcggcaccgccgccg 331
Query: 61 gataccgccgcaaacaaggagtcagacttcgttgtcatcatggcagcactcctctgcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gataccgccgcaaacaaggagtcagacttcgttgtcatcatggcagcactcctctgcgcc 391
Query: 121 ctcatatgcgtcgtcggcctcaccgccatcgcacgctgcgcctggctccgccgtggaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctcatatgcgtcgtcggcctcaccgccatcgcacgctgcgcctggctccgccgtggaccc 451
Query: 181 gtcgccgccggcgacggaaccccgccgcggcgggcatccgccgccaagggcctcaagaaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 452 gtcgccgccggcgacggaaccccgccgcggcgggcatccgccgacaagggcctcaagaaa 511
Query: 241 aaggtgctggaagcgttaccgaagttcacctacgtcgacggaggcggcaccggaaagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aaggtgctggaagcgttaccgaagttcacctacgtcgacggaggcggcaccggaaagtgg 571
Query: 301 gtggcctcgtcggagtgcgccatttgtctgtcggag 336
||||||||||||||||||||||||||||||||||||
Sbjct: 572 gtggcctcgtcggagtgcgccatttgtctgtcggag 607
>gnl|LJGI|TC73772 similar to UniRef100_A7PKU8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 1174
Score = 83.8 bits (42), Expect = 1e-15
Identities = 99/118 (83%)
Strand = Plus / Plus
Query: 311 cggagtgcgccatttgtctgtcggagtttgccgccggcgaagaggtccggtcgctgcccc 370
|||||||||| ||||| ||| ||||||| | ||||||||| ||| |||| |||||| |
Sbjct: 583 cggagtgcgcgatttgcctggcggagttcgacgccggcgacgagatccgcgtgctgccgc 642
Query: 371 agtgcggccatggcttccacgtcccctgcatcgacacgtggctcgggtcccactcctc 428
||||||| || || |||||||| |||||||||||||||||| ||||| ||||||||
Sbjct: 643 agtgcgggcacgggttccacgtgggctgcatcgacacgtggctggggtcacactcctc 700
>gnl|LJGI|TC82117 similar to UniRef100_A7QPF3 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 834
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 363 gctgccccagtgcggccatggcttccacgtcccctgcatcgacacgtggctc 414
|||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 425 gctgcctcagtgcggccatggcttccacgtgtcctgcatcgacgcgtggctc 476
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 85 gacttcgttgtcatcatggcagcactcctctgcgccctcatatgcgtcgtcggcctcacc 144
|||||||| |||||| | || || ||||||||||| ||||| |||||| ||||||| |
Sbjct: 150 gacttcgtcgtcatcctcgccgctctcctctgcgctctcatctgcgtcctcggcctggtc 209
Query: 145 gccatcgcacgctgcgcctggctccg 170
||| |||| ||||||||||| |||||
Sbjct: 210 gccgtcgcccgctgcgcctgtctccg 235
>gnl|LJGI|TC61878 similar to UniRef100_A7PKU8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1020
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 363 gctgccccagtgcggccatggcttccacgtcccctgcatcgacacgtggctc 414
|||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 433 gctgcctcagtgcggccatggcttccacgtgtcctgcatcgacgcgtggctc 484
Score = 60.0 bits (30), Expect = 1e-08
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 85 gacttcgttgtcatcatggcagcactcctctgcgccctcatatgcgtcgtcggcctcacc 144
|||||||| |||||| | || || ||||||||||| ||||| |||||| ||||||| |
Sbjct: 158 gacttcgtcgtcatcctcgccgctctcctctgcgctctcatctgcgtcctcggcctggtc 217
Query: 145 gccatcgcacgctgcgcctggctccg 170
||| |||| ||||||||||| |||||
Sbjct: 218 gccgtcgcccgctgcgcctgtctccg 243