Miyakogusa Predicted Gene

Lj0g3v0170259.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0170259.1 Non Chatacterized Hit- tr|H2MBY9|H2MBY9_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=ATM PE=4,37.93,7.9,
,CUFF.10682.1
         (213 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9...   149   8e-36
gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chr...    88   2e-17
gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosom...    86   1e-16

>gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1;
           Arabidopsis thaliana|Rep: F9C16.15 - Arabidopsis
           thaliana (Mouse-ear cress), partial (3%)
          Length = 651

 Score =  149 bits (75), Expect = 8e-36
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                       
Query: 87  aggaatatcatcaaacaacttgcgtgcatcaagcatgaaaccacatctcacatgtataag 146
           |||||||||||||||||||||| ||||||||||||||| |||| |||| |||||||||||
Sbjct: 524 aggaatatcatcaaacaacttgtgtgcatcaagcatgagaccatatctgacatgtataag 465

                                                                       
Query: 147 caaaatcttgtttctcatatacaaatccgtttcaaaatttgttattaaacatgacaattt 206
           ||||||| |||| |||||| ||| | | |||||||| ||||||| |||||||||||||||
Sbjct: 464 caaaatcatgttcctcatacacagacctgtttcaaagtttgttactaaacatgacaattt 405

              
Query: 207 tat 209
           |||
Sbjct: 404 tat 402


>gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 1047

 Score = 87.7 bits (44), Expect = 2e-17
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                       
Query: 98  caaacaacttgcgtgcatcaagcatgaaaccacatctcacatgtataagcaaaatcttgt 157
           |||||| |||||||||||||||||||| ||||||||||||||| ||| |||||| |||||
Sbjct: 715 caaacagcttgcgtgcatcaagcatgagaccacatctcacatgcatatgcaaaaccttgt 656

                       
Query: 158 ttctcatataca 169
           |  |||||||||
Sbjct: 655 tcatcatataca 644


>gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 741

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 83  tctcaggaatatcatcaaacaacttgcgtgcatcaagcatgaaaccacatctcacatgta 142
           ||||||| |||||| |||||| |||||| ||||| ||||||| ||||||| ||||||| |
Sbjct: 650 tctcaggcatatcaccaaacagcttgcgcgcatcgagcatgagaccacatttcacatgca 591

                                          
Query: 143 taagcaaaatcttgtttctcatatacaaatc 173
           ||||||||| | ||||  |||||||||||||
Sbjct: 590 taagcaaaaccctgttcatcatatacaaatc 560