Miyakogusa Predicted Gene

Lj0g3v0170109.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0170109.1 Non Chatacterized Hit- tr|Q5N8C4|Q5N8C4_ORYSJ
Putative receptor-like protein kinase 2 OS=Oryza
sativ,35.19,0.000000006,PROTEIN_KINASE_DOM,Protein kinase, catalytic
domain; PROTEIN_KINASE_ATP,Protein kinase, ATP binding ,CUFF.10676.1
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV419229 similar to UniRef100_A7NXZ3 Cluster: Chromosom...   375   e-103
gnl|LJGI|TC75937 similar to UniRef100_A7Q9W6 Cluster: Chromosome...    62   5e-09
gnl|LJGI|TC60372 similar to UniRef100_A7Q9W6 Cluster: Chromosome...    52   5e-06

>gnl|LJGI|AV419229 similar to UniRef100_A7NXZ3 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 395

 Score =  375 bits (189), Expect = e-103
 Identities = 342/393 (87%)
 Strand = Plus / Plus

                                                                       
Query: 229 cagatgctagtatatgaatttatgccaaatggaactttaagggatcacctttctgcttat 288
           ||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||  
Sbjct: 1   cagatgctagtttatgaatttatgccaaatggcacgctaagggatcacctttctgcttca 60

                                                                       
Query: 289 tcaaaagaacctcttagttttgcactgagattgaagattgctttagggtcagctaaaggt 348
           |||||||||||||| |||||| |   |||||||||| ||||  |||||||||||||||||
Sbjct: 61  tcaaaagaacctctgagtttttccacgagattgaaggttgcactagggtcagctaaaggt 120

                                                                       
Query: 349 cttgtttatctacacacagaagctgatcctccaatattccacagagatgtgaaggccacc 408
           ||||  |||||||||||||||||||||||||| ||||| ||| | ||||| |||||||| 
Sbjct: 121 cttgcgtatctacacacagaagctgatcctccgatatttcaccgcgatgtcaaggccact 180

                                                                       
Query: 409 aatatattattgaattctaaattcatagctaaagttgctgattttggactttcaagactt 468
           || ||||||||| | |||| |||    || || || |||||||||||||||||  | || 
Sbjct: 181 aacatattattggactctagattttcggcaaaggtggctgattttggactttcccggctc 240

                                                                       
Query: 469 gccccagttccagatattgaaggcaatttgcctagccatgtatctacagtggtaaaaggg 528
           ||||| ||||||||| | ||||| | | ||||| | |||||||||||||| |||||||||
Sbjct: 241 gcccctgttccagatttagaaggaattgtgcctggtcatgtatctacagttgtaaaaggg 300

                                                                       
Query: 529 accccgggctaccttgatccagagtacttcttaactcataagttgaccgataagagtgat 588
           |||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||
Sbjct: 301 accccgggttaccttgatccagagtacttcttaactcacaagttgactgacaagagtgat 360

                                            
Query: 589 gtttatagtcttggtgttgtatttttggaactt 621
           ||||||||||||||||||||| |||||||||||
Sbjct: 361 gtttatagtcttggtgttgtacttttggaactt 393


>gnl|LJGI|TC75937 similar to UniRef100_A7Q9W6 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 826

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 166 ctatcaaggctacatcatcggaaccttgtgtccttgattggatactgtgatgaaaatggt 225
           ||||||||| |||||||||| || |||||  |  ||||||| |||||||||||| | || 
Sbjct: 566 ctatcaaggttacatcatcgaaatcttgttacactgattggctactgtgatgaagaaggg 625

                                              
Query: 226 gaacagatgctagtatatgaatttatgccaaatgg 260
           || |||||||| || |||||||| ||||| |||||
Sbjct: 626 gagcagatgctggtttatgaattcatgcccaatgg 660


>gnl|LJGI|TC60372 similar to UniRef100_A7Q9W6 Cluster: Chromosome chr8 scaffold_68,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_68, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 844

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 547 ccagagtacttcttaactcataagttgaccgataagagtgatgtttatag 596
           |||||||| || || |||||||||||||| ||||| |||||||| |||||
Sbjct: 163 ccagagtatttgttgactcataagttgactgataaaagtgatgtgtatag 212