Miyakogusa Predicted Gene

Lj0g3v0169099.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0169099.1 Non Chatacterized Hit- tr|I1MVB5|I1MVB5_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,77.14,0,DYNAMIN,NULL;
DYNAMIN,Dynamin; coiled-coil,NULL; P-loop containing nucleoside
triphosphate hydrolase,CUFF.10613.1
         (621 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58940 similar to UniRef100_A7PCD2 Cluster: Chromosome...   186   1e-46
gnl|LJGI|TC67695 similar to UniRef100_A7PCD2 Cluster: Chromosome...   127   9e-29
gnl|LJGI|TC58277 homologue to UniRef100_A7PK24 Cluster: Chromoso...   109   2e-23
gnl|LJGI|BP035531 similar to UniRef100_A7HZM3 Cluster: Ribosomal...    62   4e-09
gnl|LJGI|TC58474 homologue to UniRef100_Q39821 Cluster: SDL12A; ...    58   7e-08

>gnl|LJGI|TC58940 similar to UniRef100_A7PCD2 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (35%)
          Length = 804

 Score =  186 bits (94), Expect = 1e-46
 Identities = 148/166 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgattcgctcatatgttgagaagcctaattgcttaattttggccattactcctgcaaat 60
           ||||||| ||||||| |||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 571 atgattctctcatatattgaaaagcctaattgcataattttggccattactccagcaaat 630

                                                                       
Query: 61  caagatgttgcaacatcagctgccatcatggtttccagacaagttgaccctgcaggtgaa 120
           |||||| | || |  || |||||||||| |||||||||| ||||||||| |||||||| |
Sbjct: 631 caagatatagctaactctgctgccatcaaggtttccagaaaagttgaccgtgcaggtgta 690

                                                         
Query: 121 agaacatttggtgtgttgacaaagcttgatttgatggacagaggaa 166
           ||||||| |||||||||||||||| ||||||||||| |||||||||
Sbjct: 691 agaacatatggtgtgttgacaaagtttgatttgatgaacagaggaa 736


>gnl|LJGI|TC67695 similar to UniRef100_A7PCD2 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 617

 Score =  127 bits (64), Expect = 9e-29
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                       
Query: 257 gcaatgtggatatgattgctgctcggcagagagagcgtgaattttttgtcaacaatcctg 316
           ||||||||||||||||||||||||||||||| |||||||||||||| | || || |||||
Sbjct: 1   gcaatgtggatatgattgctgctcggcagagggagcgtgaatttttcgccaccattcctg 60

                                                                       
Query: 317 attacgcacatttggctagcagaatgggctcggaatatctagcaaagcttctctcaaagc 376
           |||||||||||||||| ||||  |||||||| ||| |||| |||  ||||||||| ||| 
Sbjct: 61  attacgcacatttggccagcatgatgggctcagaacatctcgcatggcttctctctaagt 120

               
Query: 377 attt 380
           ||||
Sbjct: 121 attt 124


>gnl|LJGI|TC58277 homologue to UniRef100_A7PK24 Cluster: Chromosome chr15
           scaffold_19, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (47%)
          Length = 842

 Score =  109 bits (55), Expect = 2e-23
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 113 caggtgaaagaacatttggtgtgttgacaaagcttgatttgatggacagaggaacaaatg 172
           |||||||||| |||||||| |||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 733 caggtgaaaggacatttggggtgttgacaaagctagatttgatggacaaaggaactaatg 792

                                  
Query: 173 ctttgaatgtccttgagggaagg 195
           ||||| |||||||||| ||||||
Sbjct: 793 ctttggatgtccttgaaggaagg 815


>gnl|LJGI|BP035531 similar to UniRef100_A7HZM3 Cluster: Ribosomal protein S5; n=1;
           Campylobacter hominis ATCC BAA-381|Rep: Ribosomal
           protein S5 - Campylobacter hominis (strain ATCC BAA-381
           / LMG 19568 / NCTC 13146 /CH001A), partial (9%)
          Length = 509

 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 87/103 (84%), Gaps = 7/103 (6%)
 Strand = Plus / Minus

                                                                       
Query: 486 tgatgctggggtgaggagaatcttgttgc--tctatactatcaatataagcgaaaataat 543
           ||||||||||||||||||||| ||| |||  |||||||| |||||||||| |||||| | 
Sbjct: 489 tgatgctggggtgaggagaattttg-tgctatctatactctcaatataagtgaaaatgag 431

                                                      
Query: 544 tcctat----atattcagcacacttcctctgattttgtcaggc 582
           |  |||    ||||| | |||||||||||||||||||||||||
Sbjct: 430 ttttattaggatatttaccacacttcctctgattttgtcaggc 388


>gnl|LJGI|TC58474 homologue to UniRef100_Q39821 Cluster: SDL12A; n=1; Glycine
           max|Rep: SDL12A - Glycine max (Soybean), partial (37%)
          Length = 826

 Score = 58.0 bits (29), Expect = 7e-08
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 17  ttgagaagcctaattgcttaattttggccattactcctgcaaatcaagatgttgcaacat 76
           |||||||||| || ||  |||||||||||||| | ||||| ||||||||| |||||||||
Sbjct: 653 ttgagaagccgaactgtataattttggccatttcacctgctaatcaagatcttgcaacat 712

            
Query: 77  c 77
           |
Sbjct: 713 c 713