Miyakogusa Predicted Gene
- Lj0g3v0169039.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0169039.2 Non Chatacterized Hit- tr|D7SN77|D7SN77_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,75,0,SUBFAMILY
NOT NAMED,NULL; EUKARYOTIC TRANSLATION INITIATION FACTOR 2C,NULL;
Piwi,Stem cell self-rene,CUFF.10624.2
(1302 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69545 similar to UniRef100_A7PQL8 Cluster: Chromosome... 1209 0.0
gnl|LJGI|BW595647 similar to UniRef100_Q9SJK3 Cluster: Argonaute... 999 0.0
gnl|LJGI|BW598349 weakly similar to UniRef100_A7PQL8 Cluster: Ch... 216 3e-55
gnl|LJGI|TC81970 homologue to UniRef100_A1E5M3 Cluster: Argonaut... 58 1e-07
gnl|LJGI|TC71255 similar to UniRef100_A7NWU9 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC76231 similar to UniRef100_Q9XGW1 Cluster: Protein PI... 56 6e-07
>gnl|LJGI|TC69545 similar to UniRef100_A7PQL8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 907
Score = 1209 bits (610), Expect = 0.0
Identities = 616/618 (99%)
Strand = Plus / Plus
Query: 685 atagcaaatggtaaacgcaagcctgaaaggattatattttacagagatggtgtcagtgaa 744
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 atagcaaatggtaaacgcaagcctgaaaggattatattttacggagatggtgtcagtgaa 61
Query: 745 ggtcaatttagtcaggttttgttgtatgagatggatgcaataagaaaggcttgtatgtca 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtcaatttagtcaggttttgttgtatgagatggatgcaataagaaaggcttgtatgtca 121
Query: 805 ctagaggatgggtacttgcctcgtgttacttttgtggttgtccagaaaagacatcacacc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctagaggatgggtacttgcctcgtgttacttttgtggttgtccagaaaagacatcacacc 181
Query: 865 cgtcttttccctgctgatcacaggagtcgtgatcagatggataagagtggaaatataatg 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgtcttttccctgctgatcacaggagtcgtgatcagatggataagagtggaaatataatg 241
Query: 925 ccaggaactgttgttgacacttcgatttgccacccaagggagtttgatttttatctcaac 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccaggaactgttgttgacacttcgatttgccacccaagggagtttgatttttatctcaac 301
Query: 985 agtcatgctggaattcaaggaactagcagacctacccattatcatgttctgtatgatgag 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtcatgctggaattcaaggaactagcagacctacccattatcatgttctgtatgatgag 361
Query: 1045 aataactttacagctgatgagctacaggggctgacaaataatttatgctacacgtatgca 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aataactttacagctgatgagctacaggggctgacaaataatttatgctacacgtatgca 421
Query: 1105 aggtgcactcgatcagtttcaatagttcctccggcatattatgcacacttagctgctttt 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aggtgcactcgatcagtttcaatagttcctccggcatattatgcacacttagctgctttt 481
Query: 1165 cgagctcgcagctatatcgaaggcgaatcggaaatgggttctgctagtgcgggtgctggt 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgagctcgcagctatatcgaaggcgaatcggaaatgggttctgctagtgcgggtgctggt 541
Query: 1225 ggtgcaaccaggagcaatgttgagataaaattgcctgcaatcaaggataatgtgaaagat 1284
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 542 ggtgcaaccaggagcaatgttgagataaaattgcctgccatcaaggataatgtgaaagat 601
Query: 1285 gttatgttctactgctga 1302
||||||||||||||||||
Sbjct: 602 gttatgttctactgctga 619
>gnl|LJGI|BW595647 similar to UniRef100_Q9SJK3 Cluster: Argonaute-like protein
At2g27880; n=1; Arabidopsis thaliana|Rep: Argonaute-like
protein At2g27880 - Arabidopsis thaliana (Mouse-ear
cress), partial (15%)
Length = 524
Score = 999 bits (504), Expect = 0.0
Identities = 519/524 (99%)
Strand = Plus / Plus
Query: 146 agtcagcactgcagaatcttcacaagcagtctataacaaacctggcaaatatgaagcagc 205
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtcagcactgcaccttcttcagcagcagtctataacaaacctggcaaatatgaagcagc 60
Query: 206 agggtagattacagttgctgattataattttacctgatgtcaaggggtcctatgggaaaa 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agggtagattacagttgctgattataattttacctgatgtcaaggggtcctatgggaaaa 120
Query: 266 ttaagaaaatatgtgaaacggagttaggaattgtgtctcagtgttgccagccaaggcaag 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaagaaaatatgtgaaacggagttaggaattgtgtctcagtgttgccagccaaggcaag 180
Query: 326 ttcagaagctgaacaagcaatatcttgagaacttggcgctcaagataaatgttaaggttg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagaagctgaacaagcaatatcttgagaacttggcgctcaagataaatgttaaggttg 240
Query: 386 gtgggcgaaacacagttttaagtgatgcatttgatagaagaatccctcatgtgagtgata 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgggcgaaacacagttttaagtgatgcatttgatagaagaatccctcatgtgagtgata 300
Query: 446 aacatacaattatttttggtgcggatgtaacacatccacaaccaggggaagactcaagtc 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacatacaattatttttggtgcggatgtaacacatccacaaccaggggaagactcaagtc 360
Query: 506 cttctatagctgcagttgtggcttccatggactggccttgggtgacaaagtacaaaggca 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttctatagctgcagttgtggcttccatggactggccttgggtgacaaagtacaaaggca 420
Query: 566 ctgtttctgcccaggctcaccgagaagagattattcaggatctctttacaacatttgaag 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgtttctgcccaggctcaccgagaagagattattcaggatctctttacaacatttgaag 480
Query: 626 atcctaagaggggacttgtgcagggtgggattattagggagctg 669
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcctaagaggggacttgtgcagggtgggattattagggagctg 524
>gnl|LJGI|BW598349 weakly similar to UniRef100_A7PQL8 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 482
Score = 216 bits (109), Expect = 3e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 90 ggttttcaaccctcagcctttggttccaataaaaacagttaaccctttgcaaatagagtc 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggttttcaaccctcagcctttggttccaataaaaacagttaaccctttgcaaatagagtc 433
Query: 150 agcactgcagaatcttcacaagcagtctataacaaacctggcaaatatg 198
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agcactgcagaatcttcacaagcagtctataacaaacctggcaaatatg 482
>gnl|LJGI|TC81970 homologue to UniRef100_A1E5M3 Cluster: Argonaute 1; n=1; Pisum
sativum|Rep: Argonaute 1 - Pisum sativum (Garden pea),
partial (31%)
Length = 1029
Score = 58.0 bits (29), Expect = 1e-07
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 450 tacaattatttttggtgcggatgtaacacatccacaaccaggggaagactcaagtccttc 509
||||||||||||||| || ||||| || |||||||| || ||||| || || ||||| ||
Sbjct: 832 tacaattatttttggggcagatgtcactcatccacatcctggggaggattctagtccatc 891
Query: 510 tatagctgcagttgtggcttc 530
||||| || |||||||||||
Sbjct: 892 aatagcagctgttgtggcttc 912
>gnl|LJGI|TC71255 similar to UniRef100_A7NWU9 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 640
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1129 gttcctccggcatattatgcacacttagctgcttttcgagc 1169
|||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 8 gttcctccagcatattatgcacatttagcagcttttcgagc 48
>gnl|LJGI|TC76231 similar to UniRef100_Q9XGW1 Cluster: Protein PINHEAD; n=2;
Arabidopsis thaliana|Rep: Protein PINHEAD - Arabidopsis
thaliana (Mouse-ear cress), partial (7%)
Length = 622
Score = 56.0 bits (28), Expect = 6e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1129 gttcctccggcatattatgcacacttagctgcttttcgagctcg 1172
|||||||| ||||||||||||||||| || || |||||||||||
Sbjct: 81 gttcctccagcatattatgcacacttggccgcatttcgagctcg 124