Miyakogusa Predicted Gene
- Lj0g3v0168929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0168929.1 tr|Q69G85|Q69G85_BRANA Homeodomain-leucine zipper
protein OS=Brassica napus PE=2 SV=1,57.14,0.00006,HOMEOBOX_1,Homeobox,
conserved site; Homeodomain,Homeodomain; HOMEOBOX_2,Homeodomain;
SUBFAMILY NOT ,CUFF.10638.1
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63214 homologue to UniRef100_Q9SP48 Cluster: Homeodom... 1130 0.0
gnl|LJGI|TC69773 similar to UniRef100_Q93XA5 Cluster: Homeodomai... 856 0.0
gnl|LJGI|TC62239 similar to UniRef100_A7NUU1 Cluster: Chromosome... 90 3e-17
>gnl|LJGI|TC63214 homologue to UniRef100_Q9SP48 Cluster: Homeodomain-leucine zipper
protein 56; n=1; Glycine max|Rep: Homeodomain-leucine
zipper protein 56 - Glycine max (Soybean), partial (49%)
Length = 1076
Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Plus
Query: 1 atgaagagacttggaagatctgattctttaggtgctctcatgaagatttgtccaccaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atgaagagacttggaagatctgattctttaggtgctctcatgaagatttgtccaccaaca 566
Query: 61 acagacgaaaacctcagtccaaggagcaaccacaaccatgtttatggaagggagtttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acagacgaaaacctcagtccaaggagcaaccacaaccatgtttatggaagggagtttcag 626
Query: 121 tccatgctggaaggactagacgaggaagggtgtgttgaggaaccaggacaccactctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tccatgctggaaggactagacgaggaagggtgtgttgaggaaccaggacaccactctgag 686
Query: 181 aagaaacgaagactcagtgtggatcaagtcaaggctttggagaagaactttgaagtagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aagaaacgaagactcagtgtggatcaagtcaaggctttggagaagaactttgaagtagaa 746
Query: 241 aacaaacttgaaccagacagaaaagtgaagctagctcaagagcttggcttgcaaccgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aacaaacttgaaccagacagaaaagtgaagctagctcaagagcttggcttgcaaccgagg 806
Query: 301 caagtagctgtttggttccaaaaccgtcgagctagatggaaaaccaagcaattggaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 caagtagctgtttggttccaaaaccgtcgagctagatggaaaaccaagcaattggaaaga 866
Query: 361 gattatggcgttctgaaagcaaactatgaagcactgaaactcaaccatgattcactccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gattatggcgttctgaaagcaaactatgaagcactgaaactcaaccatgattcactccaa 926
Query: 421 cgtgacaatgaagccttgctcaatgagattaaggaattgaaatcaagggtgcaagaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 cgtgacaatgaagccttgctcaatgagattaaggaattgaaatcaagggtgcaagaagag 986
Query: 481 aacaacaacaacactgaaagtgatgcttatgtgaaggaagagatgataaccccgcaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 aacaacaacaacactgaaagtgatgcttatgtgaaggaagagatgataaccccgcaagac 1046
Query: 541 atgactccactttctgaaaccgccattcct 570
||||||||||||||||||||||||||||||
Sbjct: 1047 atgactccactttctgaaaccgccattcct 1076
>gnl|LJGI|TC69773 similar to UniRef100_Q93XA5 Cluster: Homeodomain leucine zipper
protein HDZ1; n=1; Phaseolus vulgaris|Rep: Homeodomain
leucine zipper protein HDZ1 - Phaseolus vulgaris (Kidney
bean) (French bean), partial (34%)
Length = 841
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 562 gccattcctggatccgattccaaggaattgagctatgattgctgcttcaagagctctgat 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccattcctggatccgattccaaggaattgagctatgattgctgcttcaagagctctgat 60
Query: 622 gatggggtggacggaaccaccaccgcgtcgctcttcgctgagaatctgaaagacggttct 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatggggtggacggaaccaccaccgcgtcgctcttcgctgagaatctgaaagacggttct 120
Query: 682 tccgacagcgattccagcgcgatcttgaacgaagacaacaacagtcccaacgcggcgatt 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccgacagcgattccagcgcgatcttgaacgaagacaacaacagtcccaacgcggcgatt 180
Query: 742 tcttcatctggggttcttcagagtcacgactttttcatttctccagggtcatcttcgttg 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcttcatctggggttcttcagagtcacgactttttcatttctccagggtcatcttcgttg 240
Query: 802 aagttcaactgctcttcgtcttcttcgccgtcatccatgagttgcttccagtttcagaag 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagttcaactgctcttcgtcttcttcgccgtcatccatgagttgcttccagtttcagaag 300
Query: 862 cagtaccatcctgcacagtatgtgaagatggaggagcacaatttcctcagtgctgatgag 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtaccatcctgcacagtatgtgaagatggaggagcacaatttcctcagtgctgatgag 360
Query: 922 gcttgtaactttttctcagatgaacaaccaccaaccctgcagtggtactgtcaggaagag 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcttgtaactttttctcagatgaacaaccaccaaccctgcagtggtactgtcaggaagag 420
Query: 982 tggaattgacat 993
||||||||||||
Sbjct: 421 tggaattgacat 432
>gnl|LJGI|TC62239 similar to UniRef100_A7NUU1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 693
Score = 89.7 bits (45), Expect = 3e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 265 gtgaagctagctcaagagcttggcttgcaaccgaggcaagtagctgtttggttccaaaac 324
||||||||||| |||| ||||| |||||||| | || || ||| | |||||||| ||
Sbjct: 125 gtgaagctagcagaagaacttggattgcaaccaaaacaggttgctatatggttccagaat 184
Query: 325 cgtcgagctagatggaaaaccaagcaattggaaagagattatggcgttctgaa 377
||||||||| | |||||||||||||||||||| |||||||||||| |||||||
Sbjct: 185 cgtcgagctcgttggaaaaccaagcaattggagagagattatggcattctgaa 237