Miyakogusa Predicted Gene
- Lj0g3v0168269.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0168269.1 Non Chatacterized Hit- tr|B9S2Q4|B9S2Q4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,27.27,1e-18,seg,NULL,CUFF.10542.1
(997 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68271 weakly similar to UniRef100_A7NSN1 Cluster: Chr... 258 6e-68
gnl|LJGI|GO019391 weakly similar to UniRef100_A7NSM6 Cluster: Ch... 218 5e-56
gnl|LJGI|TC76601 similar to UniRef100_A7R3G0 Cluster: Chromosome... 78 1e-13
gnl|LJGI|TC57455 weakly similar to UniRef100_A7R3G0 Cluster: Chr... 78 1e-13
>gnl|LJGI|TC68271 weakly similar to UniRef100_A7NSN1 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 609
Score = 258 bits (130), Expect = 6e-68
Identities = 312/375 (83%), Gaps = 12/375 (3%)
Strand = Plus / Plus
Query: 593 tttggcaactagctaatgttgtgagcatgttagaagattcttcaggaatcaaagccatga 652
||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 4 tttggcaactagctaatgttgtgagcatgttagaagactcttgtggattcaaagccatga 63
Query: 653 tgaagagcaatgagttgataaaggggaagaagggtttgtccttgatcatcacttttatgc 712
|||||||||| ||||||||||||||||||||| |||||| | ||||||| || ||||
Sbjct: 64 tgaagagcaacgagttgataaaggggaagaagtttttgtctataatcatcaattatatgt 123
Query: 713 ttagtgttttcttctttttgatacagtttttgttctccatggtgctttt----------- 761
|| || |||||||| ||||||||| |||||||| ||| || |
Sbjct: 124 ctaactattccttcttttcgatacagttgttgttctctgaggttgttctaaacggttgga 183
Query: 762 -gaggctgttccatgtgggcttggtgtggaaaatagcatccggggttttgtgtctccttc 820
|| || | | |||||||||| ||||||| ||||||| |||||||||||| || |
Sbjct: 184 agatgcaggttgatgtgggctttgtgtggagaatagcacttggggttttgtgtgtcttgg 243
Query: 821 tgttgtgtcatttgttgcttttgatgcttgtgattcaaactgtgctctattttgattgca 880
|||| ||| | |||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 244 tgttttgttttatgttccttttgatgcttgtgattcaaactgtgctctattttgtttgca 303
Query: 881 agtcctaccaccatgagattattggcaagtctgcattatcagaacaattggaagtatatc 940
|||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 304 agtcctaccaccatgagactattggaaagtctgcattatcagaacaattagaagtttatc 363
Query: 941 aaggagaacatgagc 955
|||||||||||||||
Sbjct: 364 aaggagaacatgagc 378
>gnl|LJGI|GO019391 weakly similar to UniRef100_A7NSM6 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 422
Score = 218 bits (110), Expect = 5e-56
Identities = 292/355 (82%), Gaps = 12/355 (3%)
Strand = Plus / Plus
Query: 593 tttggcaactagctaatgttgtgagcatgttagaagattcttcaggaatcaaagccatga 652
||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 65 tttggcaactagctaatgttgtgagcatgttagaagactcttgtggattcaaagccatga 124
Query: 653 tgaagagcaatgagttgataaaggggaagaagggtttgtccttgatcatcacttttatgc 712
|||||||||| ||||||||||||||||||||| |||||| | ||||||| || ||||
Sbjct: 125 tgaagagcaacgagttgataaaggggaagaagtttttgtctataatcatcaattatatgt 184
Query: 713 ttagtgttttcttctttttgatacagtttttgttctccatggtgctttt----------- 761
|| || |||||||| ||||||||| |||||||| ||| || |
Sbjct: 185 ctaactattccttcttttcgatacagttgttgttctctgaggttgttctaaacggttgga 244
Query: 762 -gaggctgttccatgtgggcttggtgtggaaaatagcatccggggttttgtgtctccttc 820
|| || | | |||||||||| ||||||| |||| || |||||||||||| || |
Sbjct: 245 agatgcaggttgatgtgggctttgtgtggagaataacacttggggttttgtgtgtcttgg 304
Query: 821 tgttgtgtcatttgttgcttttgatgcttgtgattcaaactgtgctctattttgattgca 880
|||| ||| | |||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 305 tgttttgttttatgttccttttgatgcttgtgattcaaactgtgctctattttgtttgca 364
Query: 881 agtcctaccaccatgagattattggcaagtctgcattatcagaacaattggaagt 935
|||||||||||||||||| |||||| ||||||| |||||||||||||||||||||
Sbjct: 365 agtcctaccaccatgagactattggaaagtctgtattatcagaacaattggaagt 419
>gnl|LJGI|TC76601 similar to UniRef100_A7R3G0 Cluster: Chromosome chr4 scaffold_519,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_519, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1155
Score = 77.8 bits (39), Expect = 1e-13
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 643 aaagccatgatgaagagcaatgagttgataaaggggaagaagggtttgtcc 693
||||| ||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 574 aaagcaatgatgaagagcaatgagttgatgaaggggaagatgggtttgtcc 624
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 860 ctgtgctctattttgattgcaagtcctaccaccatgagattattggcaagtctgcattat 919
||||||| || |||| ||||||||||||||| ||| ||| ||||| ||||||||| || |
Sbjct: 792 ctgtgctttactttgtttgcaagtcctaccatcatcagaatattgacaagtctgctttgt 851
Query: 920 caga 923
||||
Sbjct: 852 caga 855
>gnl|LJGI|TC57455 weakly similar to UniRef100_A7R3G0 Cluster: Chromosome chr4
scaffold_519, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_519, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (83%)
Length = 1268
Score = 77.8 bits (39), Expect = 1e-13
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 643 aaagccatgatgaagagcaatgagttgataaaggggaagaagggtttgtcc 693
||||| ||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 728 aaagcaatgatgaagagcaatgagttgatgaaggggaagatgggtttgtcc 778
Score = 56.0 bits (28), Expect = 4e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 54 agaatcctacatgatcatgttttcatggaggaagatctttagcctgattaccttaactct 113
||||||||||| |||||| | |||||||| || ||||| |||| || ||| |||||||
Sbjct: 139 agaatcctacaagatcatcctctcatggagaaaaatcttcagccaaatcaccctaactct 198
Query: 114 aatcctccctct 125
||||||||||||
Sbjct: 199 aatcctccctct 210
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 860 ctgtgctctattttgattgcaagtcctaccaccatgagattattggcaagtctgcattat 919
||||||| || |||| ||||||||||||||| ||| ||| ||||| ||||||||| || |
Sbjct: 945 ctgtgctttactttgtttgcaagtcctaccatcatcagaatattgacaagtctgctttgt 1004
Query: 920 caga 923
||||
Sbjct: 1005 caga 1008