Miyakogusa Predicted Gene
- Lj0g3v0167789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0167789.1 tr|G7KWV0|G7KWV0_MEDTR Endo-1,4-beta-xylanase C
OS=Medicago truncatula GN=MTR_7g024420 PE=3 SV=1,64.88,0,FAMILY NOT
NAMED,NULL; GLYCOSYL_HYDROL_F10,Glycoside hydrolase, family 10; no
description,NULL; no d,gene.g12868.t1.1
(1566 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV770592 similar to UniRef100_Q8GTJ2 Cluster: Endoxylan... 260 2e-68
gnl|LJGI|BP058305 weakly similar to UniRef100_UPI000034F169 Clus... 100 5e-20
>gnl|LJGI|AV770592 similar to UniRef100_Q8GTJ2 Cluster: Endoxylanase precursor; n=1;
Carica papaya|Rep: Endoxylanase precursor - Carica
papaya (Papaya), partial (20%)
Length = 489
Score = 260 bits (131), Expect = 2e-68
Identities = 269/315 (85%)
Strand = Plus / Plus
Query: 405 tgagctatattttgagagcaataatacttctgtggaaatatggatagacaacatttcctt 464
|||||| |||||||||||| | || ||||| |||||||| ||||| || | |||||||||
Sbjct: 127 tgagctttattttgagagcgaaaacacttcagtggaaatttggatcgatagcatttcctt 186
Query: 465 gcaaccatttacagaaaagcaatggaagtctcatcaagatcaaagcattgagaaggctcg 524
|||||| || ||| |||||||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 187 gcaacctttcacacaaaagcaatggagttctcatcaacatcaaagcactgagaaggctcg 246
Query: 525 caagaggaaggtattagtccaagcaattgatgaccaaggaaaccctttaccaaatacaag 584
|||||| |||||||||||||||||||||||||| |||||||| |||||||||||| ||||
Sbjct: 247 caagagcaaggtattagtccaagcaattgatgaacaaggaaatcctttaccaaatgcaag 306
Query: 585 tatatctatcacgcagaagaagtcaagttttccatttggaagtgccataaacaattacat 644
||| || || || |||| || | ||||||||||||| |||||||| ||| | ||||
Sbjct: 307 catacacattacacaaaagaggttaggttttccatttgggagtgccattaaccacaacat 366
Query: 645 cctaaacaacagtgcataccaaaactggttcacatcaaggttcacagtcgccacatttgc 704
||| ||||| | ||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct: 367 cctgaacaatggggcatatcaaaattggttcacctcaaggttcacagtgaccacatttga 426
Query: 705 aaatgaaatgaagtg 719
||||||||||||||
Sbjct: 427 gaatgaaatgaagtg 441
Score = 63.9 bits (32), Expect = 3e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 349 attgtcaaaacaactaaaggattcaaatttgctggtgccacttt 392
||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 20 attgtcaaaacaactgaaggactcaaattggctggtgccacttt 63
>gnl|LJGI|BP058305 weakly similar to UniRef100_UPI000034F169 Cluster: glycosyl hydrolase
family 10 protein; n=1; Arabidopsis thaliana|Rep:
glycosyl hydrolase family 10 protein - Arabidopsis
thaliana, partial (5%)
Length = 288
Score = 99.6 bits (50), Expect = 5e-20
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 1405 acagaccaaaatgggttccttgatctctctctatttcatggagattatgaaattgaaatt 1464
|||||||| |||||| |||||| | || || |||||||||||||||||| | ||||||
Sbjct: 244 acagaccagaatgggaaccttgaggtgtcactttttcatggagattatgaagtggaaatt 185
Query: 1465 agtcacccagtcaagaaggattccactttcactcaacatgtacaagtgattccaaaagat 1524
|||||||| | |||||| ||| ||| ||||||| ||||| ||||| ||||||| |||
Sbjct: 184 agtcaccctgctaagaagaattatactctcactcatcatgttcaagtagttccaaatgat 125
Query: 1525 gagtccaagaaagcaacacaatttgtacaactttctatgtag 1566
||||| |||| || | ||||||||||||||||||||||||
Sbjct: 124 gagtctgggaaatcatctcaatttgtacaactttctatgtag 83