Miyakogusa Predicted Gene
- Lj0g3v0167769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0167769.1 Non Chatacterized Hit- tr|I1JCF2|I1JCF2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20341
PE,76.69,0,seg,NULL; TPR-like,NULL; Tetratricopeptide
repeats,Tetratricopeptide repeat; TPR_1,Tetratricopeptide,CUFF.10502.1
(1428 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335428 homologue to UniRef100_A7QDV0 Cluster: Chromos... 1096 0.0
gnl|LJGI|FS361937 similar to UniRef100_A7QDU7 Cluster: Chromosom... 714 0.0
gnl|LJGI|BP040489 homologue to UniRef100_A7QDU7 Cluster: Chromos... 343 2e-93
gnl|LJGI|TC60882 similar to UniRef100_A7Q4Q6 Cluster: Chromosome... 70 4e-11
gnl|LJGI|TC60030 similar to UniRef100_A7QKT8 Cluster: Chromosome... 60 4e-08
>gnl|LJGI|FS335428 homologue to UniRef100_A7QDV0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 663
Score = 1096 bits (553), Expect = 0.0
Identities = 562/565 (99%)
Strand = Plus / Plus
Query: 1 atgttgcaagaaatgtggaatgctccccctggtttcagacccagtaagtctgcaccttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atgttgcaagaaatgtggaatgctccccctggtttcagacccagtaagtctgcaccttct 158
Query: 61 tctccagccaagcctcttggtgttccaagaactcgatctgaatcgttccacatagcccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tctccagccaagcctcttggtgttccaagaactcgatctgaatcgttccacatagcccac 218
Query: 121 aaggtcccagttggagatactccttatgttagagcaaaaaatgttcagttggttgaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaggtcccagttggagatactccttatgttagagcaaaaaatgttcagttggttgaaaag 278
Query: 181 gatccggagagagcaattccactgttctgggcagccattaatgcaggggatagagtggat 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 279 gatccggagagagcaattccactgttctgggcagccattaatgcagggggtagagtggat 338
Query: 241 agtgctttgaaagatatggctattttgatgaagcagcagaatcgatctgaaaaagccatt 300
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 339 agtgctttgaaagatatggctattgtgatgaagcagcagaatcgatctgaagaagccatt 398
Query: 301 gaagctattaaatcacttcgaagtagatgttcagatcaagctcaagagtctcttgataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gaagctattaaatcacttcgaagtagatgttcagatcaagctcaagagtctcttgataat 458
Query: 361 atcctcttggatctttacaagagatgtgggagacttgatgatcaaattgctcttttgagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atcctcttggatctttacaagagatgtgggagacttgatgatcaaattgctcttttgagg 518
Query: 421 cacaagctgtacttgattcaacaagggttggctttcaatggaaagcgcacgaaaactgcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cacaagctgtacttgattcaacaagggttggctttcaatggaaagcgcacgaaaactgcg 578
Query: 481 agatctcaaggcaagaagtttcaagtctctgtggagcaagaagccactagattgctggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agatctcaaggcaagaagtttcaagtctctgtggagcaagaagccactagattgctggga 638
Query: 541 aatctgggatgggcactgatgcagc 565
|||||||||||||||||||||||||
Sbjct: 639 aatctgggatgggcactgatgcagc 663
>gnl|LJGI|FS361937 similar to UniRef100_A7QDU7 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 649
Score = 714 bits (360), Expect = 0.0
Identities = 366/368 (99%)
Strand = Plus / Minus
Query: 1061 cgaaacctttggtaagagaaccgccaaatgagaatcatttcgcggagacgcttaagagaa 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cgaaacctttggtaagagaaccgccaaatgagaatcatttcgcggagacgcttaagagaa 590
Query: 1121 caaggtctggaaatgctgcagtgtcaatgagagtcaatgatgtgggggatttcaacaagg 1180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 589 caaggtctggaaatgctgcagggtcaatgagagtcaatgatgtgggggatttcaacaagg 530
Query: 1181 tgaatatggaattaggggtgcccctgccagagaacaaaacaagaaggctctcatcagagg 1240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgaatatggaattaggggtgccactgccagagaacaaaacaagaaggctctcatcagagg 470
Query: 1241 ataacaatgagaagaacaagatggtagacttgttaccagataacaaggactttgaagatg 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ataacaatgagaagaacaagatggtagacttgttaccagataacaaggactttgaagatg 410
Query: 1301 ctattcttgctgcaattttggagcctgcagcagagaaagcagccaatgacaagattttcc 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctattcttgctgcaattttggagcctgcagcagagaaagcagccaatgacaagattttcc 350
Query: 1361 agaagaaaactgataagaggcttaaggtttttcaagatattacattgtctttgagtccaa 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agaagaaaactgataagaggcttaaggtttttcaagatattacattgtctttgagtccaa 290
Query: 1421 gggcctga 1428
||||||||
Sbjct: 289 gggcctga 282
>gnl|LJGI|BP040489 homologue to UniRef100_A7QDU7 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 555
Score = 343 bits (173), Expect = 2e-93
Identities = 186/189 (98%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 193 gcaattccactgttctgggcagccattaatgcaggggatagagtggatagtgctttgaaa 252
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gcaattccactgttctgggcagccattaatgcaggg-atagagtggatagtgctttgaaa 59
Query: 253 gatatggctattttgatgaagcagcagaatcgatctgaaaaagccattgaagctattaaa 312
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 60 gatatggctattgtgatgaagcagcagaatcgatctgaagaagccattgaagctattaaa 119
Query: 313 tcacttcgaagtagatgttcagatcaagctcaagagtctcttgataatatcctcttggat 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tcacttcgaagtagatgttcagatcaagctcaagagtctcttgataatatcctcttggat 179
Query: 373 ctttacaag 381
|||||||||
Sbjct: 180 ctttacaag 188
Score = 315 bits (159), Expect = 4e-85
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 380 agagatgtgggagacttgatgatcaaattgctcttttgaggcacaagctgtacttgattc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agagatgtgggagacttgatgatcaaattgctcttttgaggcacaagctgtacttgattc 344
Query: 440 aacaagggttggctttcaatggaaagcgcacgaaaactgcgagatctcaaggcaagaagt 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aacaagggttggctttcaatggaaagcgcacgaaaactgcgagatctcaaggcaagaagt 404
Query: 500 ttcaagtctctgtggagcaagaagccactagattgctgg 538
|||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttcaagtctctgtggagcaagaagccactagattgctgg 443
>gnl|LJGI|TC60882 similar to UniRef100_A7Q4Q6 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 795
Score = 69.9 bits (35), Expect = 4e-11
Identities = 116/143 (81%)
Strand = Plus / Plus
Query: 118 cacaaggtcccagttggagatactccttatgttagagcaaaaaatgttcagttggttgaa 177
|||||||| || | ||| ||| |||| ||||||| ||| || | ||||||||||| ||
Sbjct: 365 cacaaggttcctgctggtgattctccctatgttaaagccaagcaggttcagttggtggat 424
Query: 178 aaggatccggagagagcaattccactgttctgggcagccattaatgcaggggatagagtg 237
|||||||| | || ||| ||| ||||||||||||| || || ||||| ||||| | |||
Sbjct: 425 aaggatcctgggaaagccatttcactgttctgggctgcaatcaatgctggggaccgtgtg 484
Query: 238 gatagtgctttgaaagatatggc 260
|| ||||||||||| ||||||||
Sbjct: 485 gagagtgctttgaaggatatggc 507
>gnl|LJGI|TC60030 similar to UniRef100_A7QKT8 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 1177
Score = 60.0 bits (30), Expect = 4e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 132 tggagatactccttatgttagagcaaaaaatgttcagttggttgaaaaggatccggag 189
|||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||| ||||||
Sbjct: 167 tggagatactccttatgtcagagctaaacatgctcagctggttgagaaggacccggag 224