Miyakogusa Predicted Gene

Lj0g3v0167399.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0167399.1 tr|Q8W106|Q8W106_ARATH AT3g27930/K24A2_2
OS=Arabidopsis thaliana GN=At3g27930 PE=2
SV=1,58.75,3e-19,seg,NULL,CUFF.10507.1
         (537 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS342508 weakly similar to UniRef100_A7PM96 Cluster: Ch...   494   e-139

>gnl|LJGI|FS342508 weakly similar to UniRef100_A7PM96 Cluster: Chromosome chr14
           scaffold_21, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (46%)
          Length = 802

 Score =  494 bits (249), Expect = e-139
 Identities = 249/249 (100%)
 Strand = Plus / Plus

                                                                       
Query: 51  caccgattctgcactgttcactcaccatctccacttcctcacaattcccaattttccaaa 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  caccgattctgcactgttcactcaccatctccacttcctcacaattcccaattttccaaa 137

                                                                       
Query: 111 ccccttgacgacgaagaaccgccaccaccaccgtcgcaatgtggaagtggtttcggaaag 170
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ccccttgacgacgaagaaccgccaccaccaccgtcgcaatgtggaagtggtttcggaaag 197

                                                                       
Query: 171 aggtaaaaccgccaccaccgccgctggtggttctggtgcctccgttattcgatttccctc 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aggtaaaaccgccaccaccgccgctggtggttctggtgcctccgttattcgatttccctc 257

                                                                       
Query: 231 ccctcgccgcgcgcaacaggatgctcgaatcctcctacgacgtcgtcttcgggaaactcg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccctcgccgcgcgcaacaggatgctcgaatcctcctacgacgtcgtcttcgggaaactcg 317

                    
Query: 291 cattgaggt 299
           |||||||||
Sbjct: 318 cattgaggt 326



 Score =  476 bits (240), Expect = e-134
 Identities = 240/240 (100%)
 Strand = Plus / Plus

                                                                       
Query: 298 gtttcaggtcctcttgatcataagcctgaagaaagcatcacaggaaatgcgttatttcgc 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtttcaggtcctcttgatcataagcctgaagaaagcatcacaggaaatgcgttatttcgc 481

                                                                       
Query: 358 tggcaaagtgatgttaatgatcctcatacattcatggacctttatgtatcgacatctgat 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tggcaaagtgatgttaatgatcctcatacattcatggacctttatgtatcgacatctgat 541

                                                                       
Query: 418 ccgattttgcggatgaggtcgtgcgcttattatcctagatatggatttggggcttttgga 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccgattttgcggatgaggtcgtgcgcttattatcctagatatggatttggggcttttgga 601

                                                                       
Query: 478 gtgttccctttgctgttgaggaaaagagaattctccgaagattatggtctgatggggttg 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtgttccctttgctgttgaggaaaagagaattctccgaagattatggtctgatggggttg 661