Miyakogusa Predicted Gene
- Lj0g3v0166949.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0166949.1 tr|G7JPG1|G7JPG1_MEDTR Zinc finger protein-like
protein OS=Medicago truncatula GN=MTR_4g059870 PE=4
,53.58,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; SUBFAMILY NOT
NAMED,NULL; SERINE/THREONINE-PROTEIN KINASE RIO,,CUFF.10453.1
(1491 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO041657 1392 0.0
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 985 0.0
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 149 6e-35
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 129 5e-29
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 98 2e-19
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 78 2e-13
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 72 1e-11
>gnl|LJGI|GO041657
Length = 847
Score = 1392 bits (702), Expect = 0.0
Identities = 760/783 (97%), Gaps = 2/783 (0%)
Strand = Plus / Minus
Query: 709 cactcagaatttggtggctcagggtcagaaccattgaggcttccaccatggctagaccaa 768
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 847 cactcagaatttg-tggctcagggtcaga-ccattgaggcttccaccatggctagaccaa 790
Query: 769 caggtcaataattcccagcttcacaatcatccacttaacttcacaaccaaaccaccaagt 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 caggtcaataattcccagcttcacaatcatccacttaacttcacaaccaaaccaccaagt 730
Query: 829 gctgcaaatttctcatcatctgatgcagtggacatgtttggatcacaacaacaagagaca 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gctgcaaatttctcatcatctgatgcagtggacatgtttggatcacaacaacaagagaca 670
Query: 889 cagtggctgaatttcagattcccagctgaaacgtcatttcctggtaattccaataacaac 948
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cagtggccgaatttcagattcccagctgaaacgtcatttcctggtaattccaataacaac 610
Query: 949 aacaataataatctattgttgttgccacatggacttaagcaagaagaacaagaagaaaac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aacaataataatctattgttgttgccacatggacttaagcaagaagaacaagaagaaaac 550
Query: 1009 aaaggagatcacttgtcgcattcgcatagtgtgcaggtaagctctttgtacttgagtaat 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaaggagatcacttgtcgcattcgcatagtgtgcaggtaagctctttgtacttgagtaat 490
Query: 1069 catcagaatcagctgcaacaacaaactcacatgggatctatgacggcgaggatcaacgac 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catcagaatcagctgcaacaacaaactcacatgggatctatgacggcgaggatcaacgac 430
Query: 1129 gacgaccacacagtagtaccctccttcaacaacattgttgaggttcagaaattgttcaag 1188
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 429 gacgaccacacagtagtaccctccttcaaccacattgttgaggttcagaaattgttcaag 370
Query: 1189 caagctgatgagaatagtaacctgaacaggttagtgagtttggaaaccagcggnnnnnnn 1248
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 caagctgatgagaatagtaacctgaacaggttagtgagtttggaaaccagcggcaacaac 310
Query: 1249 nnnnnnnnnnnngacctcggaggtggtggtgggtatttattaaatgatcatccactatca 1308
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aacaacaacaacgacctcggaggtggtggtgggtatttattaaatgatcatccactatca 250
Query: 1309 atgatgggcaataagcaagaactacattcaagctcagataacaaaaaccagctgagagac 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atgatgggcaataagcaagaactacattcaagctcagataacaaaaaccagctgagagac 190
Query: 1369 tttctgggtgttggagttaactcaataagcaggcccttcttgctgcaacaagactttgct 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tttctgggtgttggagttaactcaataagcaggcccttcttgctgcaacaagactttgct 130
Query: 1429 gaattcaatgcaatggaaaccgcaacaaaccagagccagtacaatggacactactgctag 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gaattcaatgcaatggaaaccgcaacaaaccagagccagtacaatggacactactgctag 70
Query: 1489 agt 1491
|||
Sbjct: 69 agt 67
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 985 bits (497), Expect = 0.0
Identities = 497/497 (100%)
Strand = Plus / Plus
Query: 149 cagatccggatgcagaagtgatagctttgtctccgaagtctctgatggcgactaaccgct 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 cagatccggatgcagaagtgatagctttgtctccgaagtctctgatggcgactaaccgct 152
Query: 209 tcctctgcgaaatctgtaacaaggggttccagagagaccagaacctgcagctgcatcggc 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 tcctctgcgaaatctgtaacaaggggttccagagagaccagaacctgcagctgcatcggc 212
Query: 269 gaggacacaacctgccttggaagctgaagcaaagggccaacaaagatcaagtgaggaaga 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaggacacaacctgccttggaagctgaagcaaagggccaacaaagatcaagtgaggaaga 272
Query: 329 aggtttacgtgtgcccagagaagagttgtgtccaccacgaccctagtagagcacttggag 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aggtttacgtgtgcccagagaagagttgtgtccaccacgaccctagtagagcacttggag 332
Query: 389 acttgacaggaatcaagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acttgacaggaatcaagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtg 392
Query: 449 agaagtgctccaagaaatacgctgttcattccgattggaaggcccatgccaagatttgtg 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agaagtgctccaagaaatacgctgttcattccgattggaaggcccatgccaagatttgtg 452
Query: 509 ggactagagagtacaagtgtgactgtggcacacttttctccaggaaggacagcttcataa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggactagagagtacaagtgtgactgtggcacacttttctccaggaaggacagcttcataa 512
Query: 569 ctcatagagctttttgtgacactttggctgaagaaagtgggaggataactagtactattc 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctcatagagctttttgtgacactttggctgaagaaagtgggaggataactagtactattc 572
Query: 629 cagcagctttaaccaac 645
|||||||||||||||||
Sbjct: 573 cagcagctttaaccaac 589
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 149 bits (75), Expect = 6e-35
Identities = 347/437 (79%), Gaps = 3/437 (0%)
Strand = Plus / Plus
Query: 148 ccagatccggatgcagaagtgatagctttgtctccgaagtctctgatggcgactaaccgc 207
|||||||| || ||||| ||||| ||| |||| |||||| |||| |||||||| ||| |
Sbjct: 215 ccagatccagaagcagaggtgattgctctgtcaccgaagactctaatggcgacgaacaga 274
Query: 208 ttcctctgcgaaatctgtaacaaggggttccagagagaccagaacctgcagctgcatcgg 267
||| | |||||||| || ||||| ||||| ||||| |||||||| |||||||| || |||
Sbjct: 275 ttcgtatgcgaaatttgcaacaaagggtttcagagggaccagaatctgcagcttcaccgg 334
Query: 268 cgaggacacaacctgccttggaagctgaagcaaagggccaacaaagatcaagtgaggaag 327
|||| ||||| ||||| |||||||||| ||| ||| | | ||| || |||||||||
Sbjct: 335 agaggtcacaatctgccatggaagctgaggcagaggacgagcaaggag---gtgaggaag 391
Query: 328 aaggtttacgtgtgcccagagaagagttgtgtccaccacgaccctagtagagcacttgga 387
| ||| || || ||||| || | ||||||||||| |||||| | |||| | ||
Sbjct: 392 agggtgtatgtctgcccggaaccaacgtgtgtccaccatgacccttctcgagcgttgggt 451
Query: 388 gacttgacaggaatcaagaaacacttcagcagaaaacatggtgagaagaagtggaagtgt 447
|| | || ||||| || || |||||| ||||||| || ||||||||||||||||| ||
Sbjct: 452 gatctcaccggaattaaaaagcacttctgcagaaagcacggtgagaagaagtggaaatgc 511
Query: 448 gagaagtgctccaagaaatacgctgttcattccgattggaaggcccatgccaagatttgt 507
||||| |||||||||||||| || ||||| || |||||||| || || ||||| ||||
Sbjct: 512 gagaaatgctccaagaaatatgcagttcaatctgattggaaagctcactccaaggtttgc 571
Query: 508 gggactagagagtacaagtgtgactgtggcacacttttctccaggaaggacagcttcata 567
|| || |||||||| || |||||||| ||||| | || || |||| ||| ||||||||
Sbjct: 572 ggtaccagagagtataaatgtgactgcggcacggtgttttcgaggagggatagcttcatt 631
Query: 568 actcatagagctttttg 584
|||||||||||||||||
Sbjct: 632 actcatagagctttttg 648
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 129 bits (65), Expect = 5e-29
Identities = 131/153 (85%)
Strand = Plus / Minus
Query: 400 atcaagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaagtgctcc 459
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 261 atcaagaagcacttcagcagaaagcacggtgagaagaagtggaagtgtgagaagtgctcc 202
Query: 460 aagaaatacgctgttcattccgattggaaggcccatgccaagatttgtgggactagagag 519
||||||||||| || | || |||||||| || || || | | || || || || |||
Sbjct: 201 aagaaatacgcagtcccatcagattggaaagctcacacccaaacatgcggcaccagggag 142
Query: 520 tacaagtgtgactgtggcacacttttctccagg 552
|||||||||||||||||||| || |||||||||
Sbjct: 141 tacaagtgtgactgtggcaccctcttctccagg 109
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 97.6 bits (49), Expect = 2e-19
Identities = 151/185 (81%)
Strand = Plus / Plus
Query: 403 aagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaagtgctccaag 462
||||| || ||| ||||||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 404 aagaagcatttctgcagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaag 463
Query: 463 aaatacgctgttcattccgattggaaggcccatgccaagatttgtgggactagagagtac 522
||||| || ||||| || |||||||| || || |||||||||| || || ||||||||
Sbjct: 464 aaatatgcggttcaatcggattggaaagctcactccaagatttgcggtaccagagagtat 523
Query: 523 aagtgtgactgtggcacacttttctccaggaaggacagcttcataactcatagagctttt 582
|| || || ||||| || | || || |||| ||| |||||||| || ||||| || |||
Sbjct: 524 aaatgcgattgtggaactttgttttcaaggagggatagcttcatcacgcatagggcgttt 583
Query: 583 tgtga 587
|||||
Sbjct: 584 tgtga 588
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 77.8 bits (39), Expect = 2e-13
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 220 atctgtaacaaggggttccagagagaccagaacctgcagctgcatcggcgaggacacaac 279
||||| ||||| || || || |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 541 atctgcaacaaaggctttcaaagagaccaaaacctccaacttcatcggcgaggccacaac 600
Query: 280 ctgccttggaagctgaagcaaag 302
||||| |||||||||||||||||
Sbjct: 601 ctgccgtggaagctgaagcaaag 623
Score = 67.9 bits (34), Expect = 2e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 403 aagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaagtgctccaag 462
||||| |||||| ||||||| || || ||||| || ||||| ||||| ||||||||||||
Sbjct: 721 aagaagcacttctgcagaaagcacggcgagaaaaaatggaaatgtgacaagtgctccaag 780
Query: 463 aaatacgctgttca 476
|| |||||||||||
Sbjct: 781 aagtacgctgttca 794
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 71.9 bits (36), Expect = 1e-11
Identities = 99/120 (82%)
Strand = Plus / Plus
Query: 417 cagaaaacatggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgctgttca 476
|||||| |||||||||||||||||||| ||||| |||||||||||||| || || |||||
Sbjct: 11 cagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttca 70
Query: 477 ttccgattggaaggcccatgccaagatttgtgggactagagagtacaagtgtgactgtgg 536
|| || ||||| || || |||| | ||||| || ||||| |||| |||||||||||
Sbjct: 71 atcagactggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgg 130