Miyakogusa Predicted Gene
- Lj0g3v0166159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0166159.1 tr|I1JIP3|I1JIP3_SOYBN KRR1 small subunit
processome component OS=Glycine max PE=3 SV=1,87.13,0,HIV-1 REV
BINDING PROTEIN 2, 3,Ribosomal RNA assembly KRR1; no description,NULL;
Eukaryotic type KH-,NODE_55418_length_1398_cov_52.560085.path2.1
(846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59837 similar to UniRef100_A7QW68 Cluster: Chromosome... 1574 0.0
gnl|LJGI|TC60037 similar to UniRef100_Q8LBT7 Cluster: Rev intera... 1201 0.0
>gnl|LJGI|TC59837 similar to UniRef100_A7QW68 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1521
Score = 1574 bits (794), Expect = 0.0
Identities = 797/798 (99%)
Strand = Plus / Plus
Query: 1 atggctgaagaagactacaacaacggcgcaaccaacgaagcaccgaaggagaacaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggctgaagaagactacaacaacggcgcaaccaacgaagcaccgaaggagaacaccaag 232
Query: 61 cggaaggggaagcacgacaagccgaagccatgggacgacgaccccaacatcgaccggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 cggaaggggaagcacgacaagccgaagccatgggacgacgaccccaacatcgaccggtgg 292
Query: 121 aaggtcgagaagttcgatccttcatggaacgaaggcggcatggtcgaagtgagttccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaggtcgagaagttcgatccttcatggaacgaaggcggcatggtcgaagtgagttccttc 352
Query: 181 tccacactcttccctcagtatcgcgagaagtatcttcaagaagcatggcctctcgtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tccacactcttccctcagtatcgcgagaagtatcttcaagaagcatggcctctcgtgaaa 412
Query: 241 tcttctctcaaagaattcggcgtctcctgcgaactcaatttggttgagggttcgatgacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcttctctcaaagaattcggcgtctcctgcgaactcaatttggttgagggttcgatgacg 472
Query: 301 gtttcgactaccagaaagactagggatccttatatcattgtcaaagctagggatcttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtttcgactaccagaaagactagggatccttatatcattgtcaaagctagggatcttatt 532
Query: 361 aagcttctttcgcgaagcgttcctgctcctcaggctataaagatacttgatgatgaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aagcttctttcgcgaagcgttcctgctcctcaggctataaagatacttgatgatgaagtg 592
Query: 421 caatgtgacattattaaaattagcgggatggttcgcaataaggagcgatttgtgaaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caatgtgacattattaaaattagcgggatggttcgcaataaggagcgatttgtgaaaaga 652
Query: 481 aggcaacaccttgtgggtcccaattcttccacattgaaggctctcgaaatactcactggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aggcaacaccttgtgggtcccaattcttccacattgaaggctctcgaaatactcactggc 712
Query: 541 tgctacattctcgtccagggaaacactgtttctgctatgggttcattcaaaggtttgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tgctacattctcgtccagggaaacactgtttctgctatgggttcattcaaaggtttgaaa 772
Query: 601 caagtcagaaggattgttgaagaatgcatgctgaataaactgcatcctgtttacaacatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 773 caagtcagaaggattgttgaagaatgcatgctgaataaactgcatcctgtttacagcatt 832
Query: 661 aagattcttatgatgaagaaggaacttgaaaaggatccagctcttgcccaagagaactgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 aagattcttatgatgaagaaggaacttgaaaaggatccagctcttgcccaagagaactgg 892
Query: 721 gatagatttcttccgaagttcaagaagaaaaatgttaagcaaaagaaggttaaagctaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 gatagatttcttccgaagttcaagaagaaaaatgttaagcaaaagaaggttaaagctaaa 952
Query: 781 gagaagaaaccatacact 798
||||||||||||||||||
Sbjct: 953 gagaagaaaccatacact 970
>gnl|LJGI|TC60037 similar to UniRef100_Q8LBT7 Cluster: Rev interacting protein
mis3-like; n=1; Arabidopsis thaliana|Rep: Rev
interacting protein mis3-like - Arabidopsis thaliana
(Mouse-ear cress), partial (47%)
Length = 796
Score = 1201 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 1 atggctgaagaagactacaacaacggcgcaaccaacgaagcaccgaaggagaacaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atggctgaagaagactacaacaacggcgcaaccaacgaagcaccgaaggagaacaccaag 250
Query: 61 cggaaggggaagcacgacaagccgaagccatgggacgacgaccccaacatcgaccggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cggaaggggaagcacgacaagccgaagccatgggacgacgaccccaacatcgaccggtgg 310
Query: 121 aaggtcgagaagttcgatccttcatggaacgaaggcggcatggtcgaagtgagttccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaggtcgagaagttcgatccttcatggaacgaaggcggcatggtcgaagtgagttccttc 370
Query: 181 tccacactcttccctcagtatcgcgagaagtatcttcaagaagcatggcctctcgtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tccacactcttccctcagtatcgcgagaagtatcttcaagaagcatggcctctcgtgaaa 430
Query: 241 tcttctctcaaagaattcggcgtctcctgcgaactcaatttggttgagggttcgatgacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tcttctctcaaagaattcggcgtctcctgcgaactcaatttggttgagggttcgatgacg 490
Query: 301 gtttcgactaccagaaagactagggatccttatatcattgtcaaagctagggatcttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtttcgactaccagaaagactagggatccttatatcattgtcaaagctagggatcttatt 550
Query: 361 aagcttctttcgcgaagcgttcctgctcctcaggctataaagatacttgatgatgaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagcttctttcgcgaagcgttcctgctcctcaggctataaagatacttgatgatgaagtg 610
Query: 421 caatgtgacattattaaaattagcgggatggttcgcaataaggagcgatttgtgaaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 caatgtgacattattaaaattagcgggatggttcgcaataaggagcgatttgtgaaaaga 670
Query: 481 aggcaacaccttgtgggtcccaattcttccacattgaaggctctcgaaatactcactggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aggcaacaccttgtgggtcccaattcttccacattgaaggctctcgaaatactcactggc 730
Query: 541 tgctacattctcgtccagggaaacactgtttctgctatgggttcattcaaaggtttgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgctacattctcgtccagggaaacactgtttctgctatgggttcattcaaaggtttgaaa 790
Query: 601 caagtc 606
||||||
Sbjct: 791 caagtc 796