Miyakogusa Predicted Gene
- Lj0g3v0165899.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0165899.3 CUFF.10397.3
(312 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP058168 553 e-157
gnl|LJGI|TC70556 similar to UniRef100_Q1N4U4 Cluster: Thymidylat... 367 e-101
gnl|LJGI|TC64912 similar to UniRef100_Q1N4U4 Cluster: Thymidylat... 329 6e-90
gnl|LJGI|FS353490 264 3e-70
>gnl|LJGI|BP058168
Length = 536
Score = 553 bits (279), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 27 tgtgatgattttagcatcattggagcatttaagggcaaggacaagattcagactccagaa 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 536 tgtgatgattttagcatcattggagcatttaaggncaaggacaagattcagactccagaa 477
Query: 87 aagcttaattttatccaaggatggtgatatgtctaatttaaattatgagaattttgccta 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aagcttaattttatccaaggatggtgatatgtctaatttaaattatgagaattttgccta 417
Query: 147 cctttctgaaatgggttcatgtgttccatccctagatgatatttcactgcatgaacgcgt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cctttctgaaatgggttcatgtgttccatccctagatgatatttcactgcatgaacgcgt 357
Query: 207 cgctgttttctcatcggttggtagtattaacagtggagaaacaatcagcagctcaaggac 266
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 356 cgctgttttctcatcggttggtagtattaacagtggagaaaccatcagcagctcaaggac 297
Query: 267 ttcaaagaggctgaaaataaggagtattaaattagataggtagtct 312
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttcaaagaggctgaaaataaggagtattaaattagataggtagtct 251
>gnl|LJGI|TC70556 similar to UniRef100_Q1N4U4 Cluster: Thymidylate kinase; n=1;
Oceanobacter sp. RED65|Rep: Thymidylate kinase -
Oceanobacter sp. RED65, partial (8%)
Length = 1042
Score = 367 bits (185), Expect = e-101
Identities = 277/310 (89%)
Strand = Plus / Plus
Query: 1 atgattctttccgcgtcnnnnnnntatgtgatgattttagcatcattggagcatttaagg 60
||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 483 atgattctttccgcgtcaaaaaaatatgtgatcattttagcatcattggagcatttaagg 542
Query: 61 gcaaggacaagattcagactccagaaaagcttaattttatccaaggatggtgatatgtct 120
||||| |||| ||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 543 acaaggccaaggttcagactccatagaagcttaattttatccaaggatggtgatatgtct 602
Query: 121 aatttaaattatgagaattttgcctacctttctgaaatgggttcatgtgttccatcccta 180
||||||||| ||| | || |||| |||||||||||||| | || |||||||||||||
Sbjct: 603 gatttaaattgtgaaagttctgccaacctttctgaaatgagcccacatgttccatcccta 662
Query: 181 gatgatatttcactgcatgaacgcgtcgctgttttctcatcggttggtagtattaacagt 240
||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 663 gatgatatttcaccacatgaacgctccgctgttttctcatcgattggtagtattaacagt 722
Query: 241 ggagaaacaatcagcagctcaaggacttcaaagaggctgaaaataaggagtattaaatta 300
|||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| |||
Sbjct: 723 ggagaaacaatcagcagctcaaggactttaaaaaggctgaaaataaggagtgttaagtta 782
Query: 301 gataggtagt 310
||||||||||
Sbjct: 783 gataggtagt 792
>gnl|LJGI|TC64912 similar to UniRef100_Q1N4U4 Cluster: Thymidylate kinase; n=1;
Oceanobacter sp. RED65|Rep: Thymidylate kinase -
Oceanobacter sp. RED65, partial (8%)
Length = 855
Score = 329 bits (166), Expect = 6e-90
Identities = 256/286 (89%)
Strand = Plus / Plus
Query: 25 tatgtgatgattttagcatcattggagcatttaagggcaaggacaagattcagactccag 84
|||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct: 291 tatgtgatcattttagcatcattggagcatttaaggacaaggccaatgttcagactccat 350
Query: 85 aaaagcttaattttatccaaggatggtgatatgtctaatttaaattatgagaattttgcc 144
| ||||||||| |||||||| ||||||||||||||| ||||||||| ||| | || ||||
Sbjct: 351 agaagcttaatattatccaatgatggtgatatgtctgatttaaattgtgaaagttctgcc 410
Query: 145 tacctttctgaaatgggttcatgtgttccatccctagatgatatttcactgcatgaacgc 204
|||||| ||||||| | || |||||||||||||||||||||||||| |||||||||
Sbjct: 411 aacctttatgaaatgagcccacatgttccatccctagatgatatttcaccacatgaacgc 470
Query: 205 gtcgctgttttctcatcggttggtagtattaacagtggagaaacaatcagcagctcaagg 264
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tccgctgtattctcatcgattggtagtattaacagtggagaaacaatcagcagctcaagg 530
Query: 265 acttcaaagaggctgaaaataaggagtattaaattagataggtagt 310
|||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 531 acttcaaaaaggctgaaaataaggagtgttaagttagataggtagt 576
>gnl|LJGI|FS353490
Length = 768
Score = 264 bits (133), Expect = 3e-70
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 180 agatgatatttcactgcatgaacgcgtcgctgttttctcatcggttggtagtattaacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agatgatatttcactgcatgaacgcgtcgctgttttctcatcggttggtagtattaacag 331
Query: 240 tggagaaacaatcagcagctcaaggacttcaaagaggctgaaaataaggagtattaaatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggagaaacaatcagcagctcaaggacttcaaagaggctgaaaataaggagtattaaatt 271
Query: 300 agataggtagtct 312
|||||||||||||
Sbjct: 270 agataggtagtct 258
Score = 135 bits (68), Expect = 2e-31
Identities = 82/89 (92%)
Strand = Plus / Minus
Query: 1 atgattctttccgcgtcnnnnnnntatgtgatgattttagcatcattggagcatttaagg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgattctttccgcgtcaaaaaaatatgtgatgattttagcatcattggagcatttaagg 418
Query: 61 gcaaggacaagattcagactccagaaaag 89
|||||||||||||||||||||||||||||
Sbjct: 417 gcaaggacaagattcagactccagaaaag 389