Miyakogusa Predicted Gene
- Lj0g3v0165859.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0165859.1 Non Chatacterized Hit- tr|I3SVU5|I3SVU5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.17,0,no
description,NULL; ADF_H,Actin-binding, cofilin/tropomyosin type;
COFILIN-RELATED,NULL; Actin depo,CUFF.10393.1
(396 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63884 similar to UniRef100_Q9XEN2 Cluster: Actin depo... 718 0.0
gnl|LJGI|GO012045 similar to UniRef100_Q8H9D5 Cluster: Actin dep... 426 e-119
gnl|LJGI|TC78588 similar to UniRef100_A1XJ47 Cluster: Actin depo... 268 2e-71
gnl|LJGI|TC62885 homologue to UniRef100_Q8SAG3 Cluster: Actin-de... 147 6e-35
>gnl|LJGI|TC63884 similar to UniRef100_Q9XEN2 Cluster: Actin depolymerizing factor;
n=2; Populus|Rep: Actin depolymerizing factor - Populus
tremula x Populus alba, complete
Length = 852
Score = 718 bits (362), Expect = 0.0
Identities = 365/366 (99%)
Strand = Plus / Plus
Query: 11 aaagcgtaagcacattcctggaactgcagaagaagaaaatacatcgatatgttattttca 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aaagcgtaagcacattcctggaactgcagaagaagaaaatacatcgatatgttattttca 201
Query: 71 aaattgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgagagct 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaattgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgagagct 261
Query: 131 atgaagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgactttg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atgaagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgactttg 321
Query: 191 actttgtgacacctgagaactgccaaaagagcaaaatcttttttattgcatggtctcctt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actttgtgacacctgagaactgccaaaagagcaaaatcttttttattgcatggtctcctt 381
Query: 251 ctgtagcccgaattcgccctaagatgctttatgcaacattgaaagacaggttcagaaggg 310
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 382 ctgtagcccgaattcgccctaagatgctttatgcaacatcgaaagacaggttcagaaggg 441
Query: 311 agctgcagggaatacattatgagattcaggcaacagacccaacggagatggatctcgaag 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agctgcagggaatacattatgagattcaggcaacagacccaacggagatggatctcgaag 501
Query: 371 tcctcc 376
||||||
Sbjct: 502 tcctcc 507
>gnl|LJGI|GO012045 similar to UniRef100_Q8H9D5 Cluster: Actin depolymerizing factor 6;
n=1; Solanum tuberosum|Rep: Actin depolymerizing factor
6 - Solanum tuberosum (Potato), partial (67%)
Length = 666
Score = 426 bits (215), Expect = e-119
Identities = 233/237 (98%), Gaps = 4/237 (1%)
Strand = Plus / Plus
Query: 11 aaagcgtaagcacattcctggaactgcagaa---gaagaaaatacatcgatatgttattt 67
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 102 aaagcgtaagcacattcctggaactgcagaagaagaagaaaatacatcgatatgttattt 161
Query: 68 tcaaaattgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgaga 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tcaaaattgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgaga 221
Query: 128 gctatgaagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgact 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gctatgaagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgact 281
Query: 188 ttgactttgtgacacctgagaactgccaaaagagcaaaatcttttttattgcatggt 244
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 282 ttgactttgtgacacctgagaactgccaaaagagcaaaatc-tttttattgcatggt 337
>gnl|LJGI|TC78588 similar to UniRef100_A1XJ47 Cluster: Actin depolymerizing factor 4;
n=1; Gossypium hirsutum|Rep: Actin depolymerizing factor
4 - Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (34%)
Length = 935
Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 242 ggtctccttctgtagcccgaattcgccctaagatgctttatgcaacattgaaagacaggt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggtctccttctgtagcccgaattcgccctaagatgctttatgcaacattgaaagacaggt 550
Query: 302 tcagaagggagctgcagggaatacattatgagattcaggcaacagacccaacggagatgg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcagaagggagctgcagggaatacattatgagattcaggcaacagacccaacggagatgg 610
Query: 362 atctcgaagtcctcc 376
|||||||||||||||
Sbjct: 611 atctcgaagtcctcc 625
>gnl|LJGI|TC62885 homologue to UniRef100_Q8SAG3 Cluster: Actin-depolymerizing factor;
n=1; Vitis vinifera|Rep: Actin-depolymerizing factor -
Vitis vinifera (Grape), complete
Length = 945
Score = 147 bits (74), Expect = 6e-35
Identities = 152/178 (85%)
Strand = Plus / Plus
Query: 74 ttgatgagaataagaaagaggttgtggtcgaaaaaactggaagccctgctgagagctatg 133
|||||||||| || | ||||||||||| || || ||||| |||| |||||||||||||
Sbjct: 244 ttgatgagaagaaaagggaggttgtggttgagaagactggtggcccggctgagagctatg 303
Query: 134 aagatttcactgcatccttgcctgagaacgattgcagatatgctgtctttgactttgact 193
| |||||| | || || ||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct: 304 acgatttcgcggcgtctttgcctgagaatgattgtagatatgctgtgtttgactttgatt 363
Query: 194 ttgtgacacctgagaactgccaaaagagcaaaatcttttttattgcatggtctccttc 251
|||| || ||||||| || ||||||||||||||||| || |||||||||||||||||
Sbjct: 364 ttgttacttctgagaattgtcaaaagagcaaaatcttcttcattgcatggtctccttc 421