Miyakogusa Predicted Gene

Lj0g3v0165759.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0165759.1 tr|I1J6W0|I1J6W0_SOYBN tRNA-dihydrouridine
synthase OS=Glycine max GN=Gma.11078 PE=3 SV=1,83.02,0,no
description,Aldolase-type TIM barrel; FMN-linked oxidoreductases,NULL;
Dus,tRNA-dihydrouridine sy,CUFF.10390.1
         (978 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65864 similar to UniRef100_A7R395 Cluster: Chromosome...  1939   0.0  
gnl|LJGI|FS320531 similar to UniRef100_A7R326 Cluster: Chromosom...  1174   0.0  

>gnl|LJGI|TC65864 similar to UniRef100_A7R395 Cluster: Chromosome undetermined
            scaffold_494, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_494, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (96%)
          Length = 1354

 Score = 1939 bits (978), Expect = 0.0
 Identities = 978/978 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggattaccgcaacaaaatggttcttgctccaatggttcgcgttggcactctcccattg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55   atggattaccgcaacaaaatggttcttgctccaatggttcgcgttggcactctcccattg 114

                                                                        
Query: 61   agattgctagctcttcaatatggggctgattacgtttacggcgaggaaatcgttgaccac 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115  agattgctagctcttcaatatggggctgattacgtttacggcgaggaaatcgttgaccac 174

                                                                        
Query: 121  aagattctcaagtgcgaacgccgaatcaatgagctcattggatccactgattttgtggag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175  aagattctcaagtgcgaacgccgaatcaatgagctcattggatccactgattttgtggag 234

                                                                        
Query: 181  aaggggacagaaagtgtcgtgtttagaacctgcgatcaagaaaaagatagagttgtattt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235  aaggggacagaaagtgtcgtgtttagaacctgcgatcaagaaaaagatagagttgtattt 294

                                                                        
Query: 241  caaatgggtacatctgatgctgtgagggctctagctgctgctcagttagtgtgtaatgat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295  caaatgggtacatctgatgctgtgagggctctagctgctgctcagttagtgtgtaatgat 354

                                                                        
Query: 301  gttgctgcaatagatattaacatgggttgccccaaagcattttctttgagtggtggaatg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355  gttgctgcaatagatattaacatgggttgccccaaagcattttctttgagtggtggaatg 414

                                                                        
Query: 361  ggcgctgcactgttgtccaagccagagcttattcatgatatcttaacaacattaaaaagg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415  ggcgctgcactgttgtccaagccagagcttattcatgatatcttaacaacattaaaaagg 474

                                                                        
Query: 421  aatttgagcataccggtaacatgtaaaattcgacttctaagcgaacgacatgatacggtg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475  aatttgagcataccggtaacatgtaaaattcgacttctaagcgaacgacatgatacggtg 534

                                                                        
Query: 481  gaattagccaagcgaattgagaaaactggtgtttctgctcttgcagttcatggaagaaga 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535  gaattagccaagcgaattgagaaaactggtgtttctgctcttgcagttcatggaagaaga 594

                                                                        
Query: 541  gtcctagataggcctagagatcctgcaaagtgggccgaaattgctgatgttgtgtcagca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595  gtcctagataggcctagagatcctgcaaagtgggccgaaattgctgatgttgtgtcagca 654

                                                                        
Query: 601  ttatctattccagttatagcaaatggggatgtctttgagtacgatgattttcaacgcatt 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655  ttatctattccagttatagcaaatggggatgtctttgagtacgatgattttcaacgcatt 714

                                                                        
Query: 661  aaatccgcaacaggtgcctcatcagtgatggttgctagaggggcactctggaatgcttca 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  aaatccgcaacaggtgcctcatcagtgatggttgctagaggggcactctggaatgcttca 774

                                                                        
Query: 721  atattttcacctgaaggcgaagtttcttatgaagttgtgaaaagagaatatattaggaag 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  atattttcacctgaaggcgaagtttcttatgaagttgtgaaaagagaatatattaggaag 834

                                                                        
Query: 781  tgcttcttgtgggataacgatattagaagcaccaagcatacattaagggaaatgttaacc 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  tgcttcttgtgggataacgatattagaagcaccaagcatacattaagggaaatgttaacc 894

                                                                        
Query: 841  cgttattctaatcttggactccctgaatggaaggctatagtcaaatccgaatccagtgca 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  cgttattctaatcttggactccctgaatggaaggctatagtcaaatccgaatccagtgca 954

                                                                        
Query: 901  gatctagcggaactctacggaatgggagactattaccgattagtaaaatccggttcctcc 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  gatctagcggaactctacggaatgggagactattaccgattagtaaaatccggttcctcc 1014

                              
Query: 961  gaagcattcagataatgc 978
            ||||||||||||||||||
Sbjct: 1015 gaagcattcagataatgc 1032


>gnl|LJGI|FS320531 similar to UniRef100_A7R326 Cluster: Chromosome chr7 scaffold_476,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_476, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (60%)
          Length = 800

 Score = 1174 bits (592), Expect = 0.0
 Identities = 592/592 (100%)
 Strand = Plus / Plus

                                                                       
Query: 46  ggcactctcccattgagattgctagctcttcaatatggggctgattacgtttacggcgag 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggcactctcccattgagattgctagctcttcaatatggggctgattacgtttacggcgag 268

                                                                       
Query: 106 gaaatcgttgaccacaagattctcaagtgcgaacgccgaatcaatgagctcattggatcc 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gaaatcgttgaccacaagattctcaagtgcgaacgccgaatcaatgagctcattggatcc 328

                                                                       
Query: 166 actgattttgtggagaaggggacagaaagtgtcgtgtttagaacctgcgatcaagaaaaa 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 actgattttgtggagaaggggacagaaagtgtcgtgtttagaacctgcgatcaagaaaaa 388

                                                                       
Query: 226 gatagagttgtatttcaaatgggtacatctgatgctgtgagggctctagctgctgctcag 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gatagagttgtatttcaaatgggtacatctgatgctgtgagggctctagctgctgctcag 448

                                                                       
Query: 286 ttagtgtgtaatgatgttgctgcaatagatattaacatgggttgccccaaagcattttct 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttagtgtgtaatgatgttgctgcaatagatattaacatgggttgccccaaagcattttct 508

                                                                       
Query: 346 ttgagtggtggaatgggcgctgcactgttgtccaagccagagcttattcatgatatctta 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttgagtggtggaatgggcgctgcactgttgtccaagccagagcttattcatgatatctta 568

                                                                       
Query: 406 acaacattaaaaaggaatttgagcataccggtaacatgtaaaattcgacttctaagcgaa 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 acaacattaaaaaggaatttgagcataccggtaacatgtaaaattcgacttctaagcgaa 628

                                                                       
Query: 466 cgacatgatacggtggaattagccaagcgaattgagaaaactggtgtttctgctcttgca 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cgacatgatacggtggaattagccaagcgaattgagaaaactggtgtttctgctcttgca 688

                                                                       
Query: 526 gttcatggaagaagagtcctagataggcctagagatcctgcaaagtgggccgaaattgct 585
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gttcatggaagaagagtcctagataggcctagagatcctgcaaagtgggccgaaattgct 748

                                                               
Query: 586 gatgttgtgtcagcattatctattccagttatagcaaatggggatgtctttg 637
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gatgttgtgtcagcattatctattccagttatagcaaatggggatgtctttg 800



 Score = 91.7 bits (46), Expect = 8e-18
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                         
Query: 1   atggattaccgcaacaaaatggttcttgctccaatggttcgcgttg 46
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atggattaccgcaacaaaatggttcttgctccaatggttcgcgttg 105