Miyakogusa Predicted Gene
- Lj0g3v0165409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0165409.1 tr|G7IYB6|G7IYB6_MEDTR Protein
TRIGALACTOSYLDIACYLGLYCEROL OS=Medicago truncatula GN=MTR_3g005100
PE,85.44,0,ABC TRANSPORTER PERMEASE PROTEIN-RELATED,NULL;
Permease,Permease domain; TIGR00056: conserved hypoth,CUFF.10374.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS353311 homologue to UniRef100_A7Q9L4 Cluster: Chromos... 1168 0.0
gnl|LJGI|TC68969 weakly similar to UniRef100_A7Q9L4 Cluster: Chr... 900 0.0
gnl|LJGI|FS340210 622 e-177
>gnl|LJGI|FS353311 homologue to UniRef100_A7Q9L4 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 740
Score = 1168 bits (589), Expect = 0.0
Identities = 592/593 (99%)
Strand = Plus / Minus
Query: 512 tacaatttgtaagagagttcaccaggttaggattgaatagatctgttggtggggttttag 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tacaatttgtaagagagttcaccaggttaggattgaatagatctgttggtggggttttag 681
Query: 572 ctctggctttctcaagggagctaagtcctgtggttacagcaattgtggtcgctgggcgca 631
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 ctctggctttctcaagggagctaagtcctgtagttacagcaattgtggtcgctgggcgca 621
Query: 632 ttggaagcgcttttgcagcagaactaggaaccatgcaggtttctgaacaaattgacacat 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttggaagcgcttttgcagcagaactaggaaccatgcaggtttctgaacaaattgacacat 561
Query: 692 tgagagtccttggttctgacccagttgattatctggtgacgcctagggtcatcgcatctt 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgagagtccttggttctgacccagttgattatctggtgacgcctagggtcatcgcatctt 501
Query: 752 gtattgccttaccgcttttgactctgttgtgctttacattagggatggcatcgagtgcca 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtattgccttaccgcttttgactctgttgtgctttacattagggatggcatcgagtgcca 441
Query: 812 tccttgctgatggtgtttacggcgtaagcattaacattatcttggattcagctcagcgag 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccttgctgatggtgtttacggcgtaagcattaacattatcttggattcagctcagcgag 381
Query: 872 ctctcagaccatgggacattatcagtgcaatgatcaagtcacaggtttttggtgctatca 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctctcagaccatgggacattatcagtgcaatgatcaagtcacaggtttttggtgctatca 321
Query: 932 tatctatagtgagctgtgcatggggagttacgactatgggaggtgctaaaggtgttgggg 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatctatagtgagctgtgcatggggagttacgactatgggaggtgctaaaggtgttgggg 261
Query: 992 aatctacaacatcagctgtggttctttctcttgttggtatcttcattgctgattttgcac 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatctacaacatcagctgtggttctttctcttgttggtatcttcattgctgattttgcac 201
Query: 1052 tctcgtgttgtttcttccaaggagcaggagatcagctaaagaattgtatgtaa 1104
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctcgtgttgtttcttccaaggagcaggagatcagctaaagaattgtatgtaa 148
>gnl|LJGI|TC68969 weakly similar to UniRef100_A7Q9L4 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 773
Score = 900 bits (454), Expect = 0.0
Identities = 461/462 (99%), Gaps = 1/462 (0%)
Strand = Plus / Plus
Query: 1 atgcaagcagcatcatatagtcatccagtattctgtttctcttgcagaacaaatgcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgcaagcagcatcatatagtcatccagtattctgtttctcttgcagaacaaatgcaaat 371
Query: 61 attagtccagtgaaaatccgtgcaccctatccctctcatctgaactggaaatgtgaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 attagtccagtgaaaatccgtgcaccctatccctctcatctgaactggaaatgtgaattc 431
Query: 121 aatgggagacctcatatttttaaaaattcagccatccccataaaacc-aaacagattata 179
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 432 aatgggagacctcatatttttaaaaattcagccatccccataaaacccaaacagattata 491
Query: 180 tgtgcttcctgacacaggtgatggccatccatctgcttctatgatagatggtgaaatgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgtgcttcctgacacaggtgatggccatccatctgcttctatgatagatggtgaaatgaa 551
Query: 240 cacaaaccatgcatctgcttctataatagatgatgaaatgaacccaaaccatgctcctaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cacaaaccatgcatctgcttctataatagatgatgaaatgaacccaaaccatgctcctaa 611
Query: 300 tagcatatcaccaccatttctcagcaattggtcaccaccaaggtacctgtggaggggatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tagcatatcaccaccatttctcagcaattggtcaccaccaaggtacctgtggaggggatt 671
Query: 360 atcagttttagtcctggcaggacaggtaattatgaagattttaaagggaaagattcattg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atcagttttagtcctggcaggacaggtaattatgaagattttaaagggaaagattcattg 731
Query: 420 gaggaatactcttcaacagttggagagagtggggccaagatc 461
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaggaatactcttcaacagttggagagagtggggccaagatc 773
>gnl|LJGI|FS340210
Length = 703
Score = 622 bits (314), Expect = e-177
Identities = 317/318 (99%)
Strand = Plus / Plus
Query: 1 atgcaagcagcatcatatagtcatccagtattctgtttctcttgcagaacaaatgcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgcaagcagcatcatatagtcatccagtattctgtttctcttgcagaacaaatgcaaat 444
Query: 61 attagtccagtgaaaatccgtgcaccctatccctctcatctgaactggaaatgtgaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attagtccagtgaaaatccgtgcaccctatccctctcatctgaactggaaatgtgaattc 504
Query: 121 aatgggagacctcatatttttaaaaattcagccatccccataaaaccaaacagattatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgggagacctcatatttttaaaaattcagccatccccataaaaccaaacagattatat 564
Query: 181 gtgcttcctgacacaggtgatggccatccatctgcttctatgatagatggtgaaatgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgcttcctgacacaggtgatggccatccatctgcttctatgatagatggtgaaatgaac 624
Query: 241 acaaaccatgcatctgcttctataatagatgatgaaatgaacccaaaccatgctcctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaaaccatgcatctgcttctataatagatgatgaaatgaacccaaaccatgctcctaat 684
Query: 301 agcatatcaccaccattt 318
| ||||||||||||||||
Sbjct: 685 accatatcaccaccattt 702