Miyakogusa Predicted Gene

Lj0g3v0165119.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0165119.1 Non Chatacterized Hit- tr|C5YD36|C5YD36_SORBI
Putative uncharacterized protein Sb06g024190
OS=Sorghu,47.37,0.000000000007,seg,NULL,CUFF.10342.1
         (399 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68863 weakly similar to UniRef100_A7PK81 Cluster: Chr...   551   e-156

>gnl|LJGI|TC68863 weakly similar to UniRef100_A7PK81 Cluster: Chromosome chr15
           scaffold_19, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (87%)
          Length = 1609

 Score =  551 bits (278), Expect = e-156
 Identities = 278/278 (100%)
 Strand = Plus / Plus

                                                                       
Query: 106 aacttgtctcagacacagagcgtgtgttaccagagtctctctgtcacctgctccatctca 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  aacttgtctcagacacagagcgtgtgttaccagagtctctctgtcacctgctccatctca 156

                                                                       
Query: 166 aagatccacaattatggcaccgtggactatgagcgcagacccattgtcaggtggaacgat 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aagatccacaattatggcaccgtggactatgagcgcagacccattgtcaggtggaacgat 216

                                                                       
Query: 226 atttacaggaggatatcgttgatggaaaaccctgaactgggttctgtttctgtgttgaat 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atttacaggaggatatcgttgatggaaaaccctgaactgggttctgtttctgtgttgaat 276

                                                                       
Query: 286 cagtgggagaatgaaggcaagaatcttactaagtgggagctttccagggttgtcaaggag 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cagtgggagaatgaaggcaagaatcttactaagtgggagctttccagggttgtcaaggag 336

                                                 
Query: 346 ttgaggaagtataggagacatcagagagcccttgaggt 383
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttgaggaagtataggagacatcagagagcccttgaggt 374



 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 10 cttcttcaatcctctctgaacaacaaaagc 39
          ||||||||||||||||||||||||||||||
Sbjct: 1  cttcttcaatcctctctgaacaacaaaagc 30