Miyakogusa Predicted Gene
- Lj0g3v0164339.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0164339.1 CUFF.10269.1
(2520 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043776 weakly similar to UniRef100_Q5CWL8 Cluster: Ub... 971 0.0
gnl|LJGI|BP062671 UniRef100_Q1CZI8 Cluster: Conserved domain pro... 281 1e-74
gnl|LJGI|AV769840 weakly similar to UniRef100_Q9FTA5 Cluster: T7... 248 1e-64
>gnl|LJGI|BP043776 weakly similar to UniRef100_Q5CWL8 Cluster: Ubiquitin
carboxyl-terminal hydrolase; n=2; Cryptosporidium
parvum|Rep: Ubiquitin carboxyl-terminal hydrolase -
Cryptosporidium parvum Iowa II, partial (3%)
Length = 514
Score = 971 bits (490), Expect = 0.0
Identities = 493/494 (99%)
Strand = Plus / Minus
Query: 2027 gagataaactgcagttagtggatgttcaaggaaaagtcttcaatttgactgacaatgttt 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gagataaactgcagttagtggatgttcaaggaaaagtcttcaatttgactgacaatgttt 455
Query: 2087 acagcacaacgtttcgccttctaggagtacctaggacaaacgaacaccacatctttttgc 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 acagcacaacgtttcgccttctaggagtacctaggacaaacgaacaccacatctttttgc 395
Query: 2147 gcagatttggagttcatacttccttagtccatcagttaaaagataagtataccttacatt 2206
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 394 gcagatttggagttcatacttccgtagtccatcagttaaaagataagtataccttacatt 335
Query: 2207 tgacaaagcgaaacccgccttatgttgaggggctgaagctgaaagactgtggagtaaatt 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgacaaagcgaaacccgccttatgttgaggggctgaagctgaaagactgtggagtaaatt 275
Query: 2267 tagtgtttgaaggtgatgatgattatgagggagatgaagaatcactggaagaaggacaat 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tagtgtttgaaggtgatgatgattatgagggagatgaagaatcactggaagaaggacaat 215
Query: 2327 attctgtttcacaaaaattagctaagttcttcaacactactgcagaagataaccctgacc 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 attctgtttcacaaaaattagctaagttcttcaacactactgcagaagataaccctgacc 155
Query: 2387 cttgtgcggaagataaccctgacccttgtgtaggggcggagggatcggggtggctcaccg 2446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cttgtgcggaagataaccctgacccttgtgtaggggcggagggatcggggtggctcaccg 95
Query: 2447 gtgccgccacgcccctcatcttttttactttcatttggatactatgtatatttttctttt 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gtgccgccacgcccctcatcttttttactttcatttggatactatgtatatttttctttt 35
Query: 2507 ggcccctgtggtaa 2520
||||||||||||||
Sbjct: 34 ggcccctgtggtaa 21
>gnl|LJGI|BP062671 UniRef100_Q1CZI8 Cluster: Conserved domain protein; n=1; Myxococcus
xanthus DK 1622|Rep: Conserved domain protein -, partial
(1%)
Length = 450
Score = 281 bits (142), Expect = 1e-74
Identities = 175/186 (94%)
Strand = Plus / Plus
Query: 1 atgcaggacagagaagagaaagcaaaagaggttgtccttcagacagaccactttcaacca 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 atgcaggacagagaagagaaagcaaaagaggtggtccttcagacagaccactttcaacca 324
Query: 61 atggtttccctaagattgcttcaaattaattattcaagattggaaggacaatttagatgt 120
| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 325 agggtttccctaagatggcttcaaattaattattcaagatgggaaggacactttagatgt 384
Query: 121 ctgcctccaggactaaagtggttgcagtggaaacaatgtccattaaggaattttccttca 180
| |||||||| ||||||||||| |||| |||||||| |||||||||||||||| ||||||
Sbjct: 385 cggcctccagaactaaagtggtggcaggggaaacaaggtccattaaggaatttcccttca 444
Query: 181 ggttat 186
||||||
Sbjct: 445 ggttat 450
>gnl|LJGI|AV769840 weakly similar to UniRef100_Q9FTA5 Cluster: T7N9.24; n=3; Arabidopsis
thaliana|Rep: T7N9.24 - Arabidopsis thaliana (Mouse-ear
cress), partial (4%)
Length = 256
Score = 248 bits (125), Expect = 1e-64
Identities = 185/205 (90%)
Strand = Plus / Minus
Query: 2180 agttaaaagataagtataccttacatttgacaaagcgaaacccgccttatgttgaggggc 2239
|||||||||||| || |||||| ||||||||||||||||||||||| |||||| ||||||
Sbjct: 244 agttaaaagataggtgtaccttgcatttgacaaagcgaaacccgccctatgttaaggggc 185
Query: 2240 tgaagctgaaagactgtggagtaaatttagtgtttgaaggtgatgatgattatgagggag 2299
|| ||||||| | |||||| || ||||||||||||||||||||||||||| ||||||||
Sbjct: 184 tggagctgaagaattgtggaatatatttagtgtttgaaggtgatgatgattttgagggag 125
Query: 2300 atgaagaatcactggaagaaggacaatattctgtttcacaaaaattagctaagttcttca 2359
|||| | |||||| |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 124 atgagggatcactagaagaaggtcaatactctgtttcacaaaaattagctaagttcttca 65
Query: 2360 acactactgcagaagataaccctga 2384
|||||| |||||||| | |||||||
Sbjct: 64 acactagtgcagaaggtgaccctga 40