Miyakogusa Predicted Gene

Lj0g3v0164299.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0164299.1 Non Chatacterized Hit- tr|K3YWL7|K3YWL7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018663,42.4,2e-17,coiled-coil,NULL,CUFF.10267.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67621 weakly similar to UniRef100_A7PT35 Cluster: Chr...   797   0.0  

>gnl|LJGI|TC67621 weakly similar to UniRef100_A7PT35 Cluster: Chromosome chr8
           scaffold_29, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (95%)
          Length = 805

 Score =  797 bits (402), Expect = 0.0
 Identities = 402/402 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgggagttaagagaagttcaatcttactcactctcgctttcctaatgtttatgggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12  atggtgggagttaagagaagttcaatcttactcactctcgctttcctaatgtttatgggt 71

                                                                       
Query: 61  attgccgtctatttcaggctttgggccattgactacaacatgtcttctgatgacactgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  attgccgtctatttcaggctttgggccattgactacaacatgtcttctgatgacactgag 131

                                                                       
Query: 121 ctcataaggcgacagtttgatcttgccaacagggaggcaatggatgaatctgctgagtgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ctcataaggcgacagtttgatcttgccaacagggaggcaatggatgaatctgctgagtgg 191

                                                                       
Query: 181 aggctaaagtatgatgaggaggtaaatagggcaaacaagtgcttaaaggaacttcgagcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aggctaaagtatgatgaggaggtaaatagggcaaacaagtgcttaaaggaacttcgagcg 251

                                                                       
Query: 241 tttcaggagtcctctaaaaaagcagaggatgcttctggtattaaccataaattggctata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tttcaggagtcctctaaaaaagcagaggatgcttctggtattaaccataaattggctata 311

                                                                       
Query: 301 ctgcaaaaggagaatgctatcttgcttgaaagggtggaaacattaaaacgagaggttgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctgcaaaaggagaatgctatcttgcttgaaagggtggaaacattaaaacgagaggttgaa 371

                                                     
Query: 361 gatgaaaagtcgaagtgcaattcacgatacatgaactaatca 402
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gatgaaaagtcgaagtgcaattcacgatacatgaactaatca 413