Miyakogusa Predicted Gene

Lj0g3v0164179.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0164179.2 Non Chatacterized Hit- tr|J3L465|J3L465_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G4,41.67,1e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.10271.2
         (564 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58286 similar to UniRef100_Q9M0H8 Cluster: Predicted ...   226   1e-58
gnl|LJGI|TC68997 similar to UniRef100_A7PJ36 Cluster: Chromosome...   105   3e-22
gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted ...    74   1e-12

>gnl|LJGI|TC58286 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich
           protein; n=1; Arabidopsis thaliana|Rep: Predicted
           proline-rich protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (40%)
          Length = 1035

 Score =  226 bits (114), Expect = 1e-58
 Identities = 189/214 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaaagtatgtggacaacctcatgcggtttctggagggaattagttctaagctatca 60
           |||||||| |||  ||||||||||||||||||||||||||| |||||||| | ||| |||
Sbjct: 375 atgaaaaaatatacggacaacctcatgcggtttctggaggggattagttcgaggctttca 434

                                                                       
Query: 61  cagttggagttacattactacaatcttgaccaatctattggagaaatgaaatctgaatta 120
           |||||||| ||| ||| ||||||||||||| |||||||||||||||||||||||||||| 
Sbjct: 435 cagttggaattatattgctacaatcttgacaaatctattggagaaatgaaatctgaattg 494

                                                                       
Query: 121 aattttaaccttggggagcaatattcaaagctcaaatctctagaaaagcaccttcaagaa 180
           |||  | |||  ||||||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct: 495 aatcgtgaccacggggagcaagattcaaagctgaaatctcttgaaaagcaccttcaagaa 554

                                             
Query: 181 attcacagctctgaacaagttttaagagtcaagc 214
            ||||||| |||| |||| ||||||||| |||||
Sbjct: 555 gttcacaggtctgtacaaattttaagagacaagc 588



 Score =  167 bits (84), Expect = 9e-41
 Identities = 192/228 (84%)
 Strand = Plus / Plus

                                                                       
Query: 210 caagcctcaacttgctcagaaagaatcatcttccttgagacattcactgtccaatgagga 269
           ||||| |||||| |||||||||||||||||||| | ||| ||||| | ||||||||||||
Sbjct: 620 caagcttcaactcgctcagaaagaatcatcttcatcgagccattcgcagtccaatgagga 679

                                                                       
Query: 270 cagatctccttctaccaaatatgctaagaaaactgataatgcatctgatgctcccaacag 329
           || |||||||||||| | | || |||| ||| |||||||||||||||||||  |||||  
Sbjct: 680 caaatctccttctactacagattctaaaaaagctgataatgcatctgatgcatccaacca 739

                                                                       
Query: 330 gtggatatcttttaccccgccccatcaaattgcccctcagcctcagcctacaacagcccc 389
           |  | || || || ||| |||| |||||||||||||||||||||||||| || |||||| 
Sbjct: 740 gcagttagctcttgccctgcccaatcaaattgcccctcagcctcagcctgcagcagccca 799

                                                           
Query: 390 gccccaagctccgacaccttatgtgactcaagccactcaacaacctgc 437
           ||||||||||||  | ||  |||||||||| ||| |||||||||||||
Sbjct: 800 gccccaagctcctgctccaaatgtgactcaggcccctcaacaacctgc 847


>gnl|LJGI|TC68997 similar to UniRef100_A7PJ36 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 1413

 Score =  105 bits (53), Expect = 3e-22
 Identities = 137/165 (83%)
 Strand = Plus / Plus

                                                                       
Query: 273 atctccttctaccaaatatgctaagaaaactgataatgcatctgatgctcccaacaggtg 332
           |||||||||||| | | || |||| ||| |||||||||||||||||||  |||||  |  
Sbjct: 15  atctccttctactacagattctaaaaaagctgataatgcatctgatgcatccaaccagca 74

                                                                       
Query: 333 gatatcttttaccccgccccatcaaattgcccctcagcctcagcctacaacagccccgcc 392
           | || || || ||| |||| |||||||||||||||||||||||||| || |||||| |||
Sbjct: 75  gttagctcttgccctgcccaatcaaattgcccctcagcctcagcctgcagcagcccagcc 134

                                                        
Query: 393 ccaagctccgacaccttatgtgactcaagccactcaacaacctgc 437
           |||||||||  | ||  |||||||||| ||| |||||||||||||
Sbjct: 135 ccaagctcctgctccaaatgtgactcaggcccctcaacaacctgc 179


>gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich
           protein; n=1; Arabidopsis thaliana|Rep: Predicted
           proline-rich protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (35%)
          Length = 1361

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                       
Query: 16  gacaacctcatgcggtttctggagggaattagttctaagctatcacagttggagttacat 75
           |||||||| ||| ||||||| ||||||||| |||| | ||||||||||||||| ||| ||
Sbjct: 581 gacaaccttatgaggtttcttgagggaattggttcaaggctatcacagttggaattatat 640

                                            
Query: 76  tactacaatcttgaccaatctattggagaaatg 108
           |  || ||||||||| |||| ||||| ||||||
Sbjct: 641 tgttataatcttgacaaatcaattggggaaatg 673