Miyakogusa Predicted Gene
- Lj0g3v0164069.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0164069.1 Non Chatacterized Hit- tr|C5X2U4|C5X2U4_SORBI
Putative uncharacterized protein Sb02g008135
(Fragment,45.45,1e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; DUF793,Protein BYPASS-related,CUFF.10250.1
(1162 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320394 similar to UniRef100_A7Q7B0 Cluster: Chromosom... 866 0.0
gnl|LJGI|TC76745 similar to UniRef100_A7Q7B0 Cluster: Chromosome... 803 0.0
gnl|LJGI|TC69621 similar to UniRef100_A7Q7B0 Cluster: Chromosome... 751 0.0
gnl|LJGI|TC70871 similar to UniRef100_A7Q7B0 Cluster: Chromosome... 92 9e-18
>gnl|LJGI|FS320394 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 776
Score = 866 bits (437), Expect = 0.0
Identities = 437/437 (100%)
Strand = Plus / Plus
Query: 1 atgcgtactaaagcagaatttcaaggttcaattctgagtttccgtggtgctcaggttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atgcgtactaaagcagaatttcaaggttcaattctgagtttccgtggtgctcaggttcac 399
Query: 61 tccatggaaggttcaacttttgacccggagcttgattcgtttcagaaacacgtcactgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tccatggaaggttcaacttttgacccggagcttgattcgtttcagaaacacgtcactgac 459
Query: 121 cgattcagcgagctgtcttcggtttcaaacgatgaattgctctcactttcgtggattagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cgattcagcgagctgtcttcggtttcaaacgatgaattgctctcactttcgtggattagg 519
Query: 181 aagctccttgattcattcatatgttgccaagaggaattcaggatgattctccacaaccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aagctccttgattcattcatatgttgccaagaggaattcaggatgattctccacaaccac 579
Query: 241 aaggcgctagtggtgaaatcccctttggatcgcatggtgggtgatttcttcgagcggagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aaggcgctagtggtgaaatcccctttggatcgcatggtgggtgatttcttcgagcggagt 639
Query: 301 gtgaaggcgttggatgtttgtaacgcaatccgtgatgggattgagcagattaggcaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gtgaaggcgttggatgtttgtaacgcaatccgtgatgggattgagcagattaggcaatgg 699
Query: 361 aagaagctcttggagattgttctatgtgctttggatcagaaaaagaacattggtgagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aagaagctcttggagattgttctatgtgctttggatcagaaaaagaacattggtgagggt 759
Query: 421 caatttcgccgggccaa 437
|||||||||||||||||
Sbjct: 760 caatttcgccgggccaa 776
>gnl|LJGI|TC76745 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 633
Score = 803 bits (405), Expect = 0.0
Identities = 418/421 (99%), Gaps = 1/421 (0%)
Strand = Plus / Plus
Query: 110 acgtcactgaccgattcagcgagctgtcttcggtttcaaacgatgaattgctctcacttt 169
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 12 acgtcactgaccgattcagcgagctgtcttcctttt-aaacgatgaattgctctcacttt 70
Query: 170 cgtggattaggaagctccttgattcattcatatgttgccaagaggaattcaggatgattc 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cgtggattaggaagctccttgattcattcatatgttgccaagaggaattcaggatgattc 130
Query: 230 tccacaaccacaaggcgctagtggtgaaatcccctttggatcgcatggtgggtgatttct 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tccacaaccacaaggcgctagtggtgaaatcccctttggatcgcatggtgggtgatttct 190
Query: 290 tcgagcggagtgtgaaggcgttggatgtttgtaacgcaatccgtgatgggattgagcaga 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcgagcggagtgtgaaggcgttggatgtttgtaacgcaatccgtgatgggattgagcaga 250
Query: 350 ttaggcaatggaagaagctcttggagattgttctatgtgctttggatcagaaaaagaaca 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttaggcaatggaagaagctcttggagattgttctatgtgctttggatcagaaaaagaaca 310
Query: 410 ttggtgagggtcaatttcgccgggccaaaaaggctcttgttgatttagctattgggatgc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttggtgagggtcaatttcgccgggccaaaaaggctcttgttgatttagctattgggatgc 370
Query: 470 tagatgacaaggattctaatgctaattccatagcacatagaaacagatcatttggtagaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tagatgacaaggattctaatgctaattccatagcacatagaaacagatcatttggtagaa 430
Query: 530 a 530
|
Sbjct: 431 a 431
Score = 278 bits (140), Expect = 7e-74
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 593 cttttggtcaatttcgatcgctttcatggagtgtctcgcggaattggtctgctgcgaggc 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cttttggtcaatttcgatcgctttcatggagtgtctcgcggaattggtctgctgcgaggc 553
Query: 653 aactacaagcaattgggaacaacctgagccctcctaaggcgagtgaaattgttgctacca 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aactacaagcaattgggaacaacctgagccctcctaaggcgagtgaaattgttgctacca 613
Query: 713 atggccttgcattggttgtt 732
||||||||||||||||||||
Sbjct: 614 atggccttgcattggttgtt 633
>gnl|LJGI|TC69621 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 642
Score = 751 bits (379), Expect = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus
Query: 784 attccttgccaggaccggggcttgaacctgcatttctcggttccgcggcagtttttgtgg 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attccttgccaggaccggggcttgaacctgcatttctcggttccgcggcagtttttgtgg 60
Query: 844 gctgctccgatgacctcgcttcacgaccggattctggaggagtcgaggaagagggagagg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgctccgatgacctcgcttcacgaccggattctggaggagtcgaggaagagggagagg 120
Query: 904 aagaattcttgtgggctgatgagggagattcagcagattgagaagtgtgctagggcgatg 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaattcttgtgggctgatgagggagattcagcagattgagaagtgtgctagggcgatg 180
Query: 964 aatgagttgggggattctgtgcagtttcctttgagtgagaagaaagaggaggaggttagg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgagttgggggattctgtgcagtttcctttgagtgagaagaaagaggaggaggttagg 240
Query: 1024 catagagtgcaggatgttgtgagtgtctgtgaggacttgaaagagggattggaccctttg 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catagagtgcaggatgttgtgagtgtctgtgaggacttgaaagagggattggaccctttg 300
Query: 1084 gagtgccaagtgagggaggtttttcgaagaattgtgtgcagtcgaatggacgggcttgat 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagtgccaagtgagggaggtttttcgaagaattgtgtgcagtcgaatggacgggcttgat 360
Query: 1144 tcacttggtagagactagt 1162
|||||||||||||||||||
Sbjct: 361 tcacttggtagagactagt 379
>gnl|LJGI|TC70871 similar to UniRef100_A7Q7B0 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 765
Score = 91.7 bits (46), Expect = 9e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 880 gaggagtcgaggaagagggagaggaagaattcttgtgggctgatgagggagattcagcag 939
|||||||||| |||| ||||| |||||||| ||||||| || | | ||||||| | |||
Sbjct: 52 gaggagtcgaagaagcgggagcggaagaatgcttgtggtttgctcaaggagatttatcag 111
Query: 940 attgagaagtgtgctagggcgatgaatgagttgggggattctgtgcagtt 989
|||||||| ||||||||||| |||||||| |||| ||||||||||||||
Sbjct: 112 attgagaaatgtgctagggccatgaatgaattggctgattctgtgcagtt 161