Miyakogusa Predicted Gene
- Lj0g3v0164019.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0164019.1 Non Chatacterized Hit- tr|F6HX39|F6HX39_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.54,0.00000000000002,seg,NULL; NARP1,N-terminal
acetyltransferase A, auxiliary subunit,CUFF.10244.1
(303 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68018 similar to UniRef100_A7P7G9 Cluster: Chromosome... 424 e-118
gnl|LJGI|FS331365 similar to UniRef100_A7P7G9 Cluster: Chromosom... 408 e-114
gnl|LJGI|FS325458 homologue to UniRef100_A7P7G9 Cluster: Chromos... 228 2e-59
gnl|LJGI|FS318617 weakly similar to UniRef100_Q4H2F4 Cluster: Su... 165 2e-40
gnl|LJGI|GO012803 similar to UniRef100_A7P7G9 Cluster: Chromosom... 153 7e-37
gnl|LJGI|TC67440 weakly similar to UniRef100_A7PQJ6 Cluster: Chr... 135 2e-31
gnl|LJGI|TC66852 similar to UniRef100_Q9XGG7 Cluster: Nodulin26-... 101 2e-21
gnl|LJGI|TC78856 80 9e-15
gnl|LJGI|BP055117 similar to UniRef100_UPI0000EB1D90 Cluster: In... 78 3e-14
>gnl|LJGI|TC68018 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1012
Score = 424 bits (214), Expect = e-118
Identities = 229/234 (97%)
Strand = Plus / Plus
Query: 1 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 369
Query: 61 ttacttccttctcagaaaaataaaatgagacaaaaacaaagaaaggcagaagcaagagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttacttccttctcagaaaaataaaatgagacaaaaacaaagaaaggcagaagcaagagct 429
Query: 121 aagaaaggggcagaggaaaagaatgaagagttaagtgctagtgaggtattcaagtctagg 180
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 430 aagaaaggggcagaggaaaagaatgaagagttaagtgccagtgaggtatccaagtctaga 489
Query: 181 aaacgacatgtaaaacctgtgaatcctgatccacatggggagaagttattgcag 234
||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaacggcatgtaaaacttgtgaatcctgatccacatggggagaagttattgcag 543
>gnl|LJGI|FS331365 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 806
Score = 408 bits (206), Expect = e-114
Identities = 227/234 (97%)
Strand = Plus / Plus
Query: 1 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 606
Query: 61 ttacttccttctcagaaaaataaaatgagacaaaaacaaagaaaggcagaagcaagagct 120
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttacttccttctcaaaaaaagaaaatgagacaaaaacaaagaaaggcagaagcaagagct 666
Query: 121 aagaaaggggcagaggaaaagaatgaagagttaagtgctagtgaggtattcaagtctagg 180
|||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 667 aagaaaggggcataggaaaagaatgaagagttaagtgccagtgaggtatccaagtctaga 726
Query: 181 aaacgacatgtaaaacctgtgaatcctgatccacatggggagaagttattgcag 234
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aaacggcatgtaaaacctgtgaatcctgatccacatggggagaagttattgcag 780
>gnl|LJGI|FS325458 homologue to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 718
Score = 228 bits (115), Expect = 2e-59
Identities = 124/127 (97%)
Strand = Plus / Plus
Query: 1 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgtgcttctttttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 561
Query: 61 ttacttccttctcagaaaaataaaatgagacaaaaacaaagaaaggcagaagcaagagct 120
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttacttccttctcaaaaaaagaaaatgagacaaaaacaaagaaaggcagaagcaagagct 621
Query: 121 aagaaag 127
|||||||
Sbjct: 622 aagaaag 628
>gnl|LJGI|FS318617 weakly similar to UniRef100_Q4H2F4 Cluster: Sublingual acinar
membrane protein; n=1; Mus musculus|Rep: Sublingual
acinar membrane protein - Mus musculus (Mouse), partial
(4%)
Length = 723
Score = 165 bits (83), Expect = 2e-40
Identities = 101/107 (94%)
Strand = Plus / Plus
Query: 1 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 617 atgtgcttctctttgctggtgagtggtgatggtgtcaaaatagatgaggagatgtcaaat 676
Query: 61 ttacttccttctcagaaaaataaaatgagacaaaaacaaagaaaggc 107
|| |||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 677 ttgcttccttctcagaaaaggaaaattagacaaaaacaaagaaaggc 723
>gnl|LJGI|GO012803 similar to UniRef100_A7P7G9 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 743
Score = 153 bits (77), Expect = 7e-37
Identities = 164/193 (84%)
Strand = Plus / Plus
Query: 42 agatgaggagatgtcaaagttacttccttctcagaaaaataaaatgagacaaaaacaaag 101
|||||| || ||||| ||||| ||||| ||||||||||| ||| |||| |||||||| ||
Sbjct: 326 agatgatgatatgtctaagttgcttccatctcagaaaaagaaattgaggcaaaaacagag 385
Query: 102 aaaggcagaagcaagagctaagaaaggggcagaggaaaagaatgaagagttaagtgctag 161
|||||| ||||||||||||||||||| |||||| |||||||||||||| | |||||| ||
Sbjct: 386 aaaggcggaagcaagagctaagaaagaggcagaagaaaagaatgaagaatcaagtgccag 445
Query: 162 tgaggtattcaagtctaggaaacgacatgtaaaacctgtgaatcctgatccacatgggga 221
|| | ||| |||||| |||||||||| | ||||||||| |||| ||||||| ||||||
Sbjct: 446 tgggatatcaaagtctgggaaacgacaggcaaaacctgttgatccagatccacgtgggga 505
Query: 222 gaagttattgcag 234
|| || ||||||
Sbjct: 506 aaaattgttgcag 518
>gnl|LJGI|TC67440 weakly similar to UniRef100_A7PQJ6 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (40%)
Length = 607
Score = 135 bits (68), Expect = 2e-31
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgtgcttctctttgctggtgagtggtgatggtgtcaaagtagatgaggagatgtcaaag 595
Query: 61 ttacttccttct 72
|| |||||||||
Sbjct: 596 ttgcttccttct 607
>gnl|LJGI|TC66852 similar to UniRef100_Q9XGG7 Cluster: Nodulin26-like major intrinsic
protein; n=1; Pisum sativum|Rep: Nodulin26-like major
intrinsic protein - Pisum sativum (Garden pea), partial
(29%)
Length = 1009
Score = 101 bits (51), Expect = 2e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 126 aggggcagaggaaaagaatgaagagttaagtgctagtgaggtattcaagtctaggaaacg 185
||||||||||||||||||||||||||||||||| ||| ||||| ||||| | |||||||
Sbjct: 612 aggggcagaggaaaagaatgaagagttaagtgccggtggggtatccaagtttgggaaacg 671
Query: 186 acatgtaaaacctgt 200
|||||||||||||||
Sbjct: 672 acatgtaaaacctgt 686
>gnl|LJGI|TC78856
Length = 508
Score = 79.8 bits (40), Expect = 9e-15
Identities = 65/73 (89%), Gaps = 4/73 (5%)
Strand = Plus / Plus
Query: 232 cagattggccaagagaaagggatgcagcatc----acaaccacctttgtctgagtttttt 287
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 91 cagattggcccagagaaagggatgcagcaaggaagacaaccacctttgtctgagtttttg 150
Query: 288 ctcctctttctga 300
|||||||||||||
Sbjct: 151 ctcctctttctga 163
>gnl|LJGI|BP055117 similar to UniRef100_UPI0000EB1D90 Cluster: Interferon regulatory
factor 5 (IRF-5).; n=2; Canis lupus familiaris|Rep:
Interferon, partial (2%)
Length = 447
Score = 77.8 bits (39), Expect = 3e-14
Identities = 64/72 (88%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 233 agattggccaagagaaagggatgcagcatc----acaaccacctttgtctgagttttttc 288
||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 343 agattggcccagagaaagggatgcagcaaggaagacaaccacctttgtctgagtttttgc 284
Query: 289 tcctctttctga 300
||||||||||||
Sbjct: 283 tcctctttctga 272