Miyakogusa Predicted Gene

Lj0g3v0163519.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0163519.1 Non Chatacterized Hit- tr|K3Y967|K3Y967_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010731,67.44,4e-19,coiled-coil,NULL,CUFF.10202.1
         (369 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP077132 similar to UniRef100_A7P1K4 Cluster: Chromosom...   398   e-111
gnl|LJGI|TC73163 similar to UniRef100_A7P1K4 Cluster: Chromosome...   170   4e-42

>gnl|LJGI|BP077132 similar to UniRef100_A7P1K4 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 366

 Score =  398 bits (201), Expect = e-111
 Identities = 207/209 (99%)
 Strand = Plus / Minus

                                                                       
Query: 161 agcgcaggctagaattgttgcaagcacgtgagaagcataaggaagagcaagtgagatctt 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agcgcaggctagaattgttgcaagcacgtgagaagcataaggaagagcaagtgagatctt 307

                                                                       
Query: 221 tgaagcactctatggaaagtggaatggcacaggcaatgaaagagcaagctcaactcaggg 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgaagcactctatggaaagtggaatggcacaggcaatgaaagagcaagctcaactcaggg 247

                                                                       
Query: 281 aggagatggcttaccagtacaagctaggaaacttcgaggctgccgctgccatccagagaa 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aggagatggcttaccagtacaagctaggaaacttcgaggctgccgctgccatccagagaa 187

                                        
Query: 341 gggtggaccccgatcctgccatgtagtcg 369
           || ||||||| ||||||||||||||||||
Sbjct: 186 ggttggaccctgatcctgccatgtagtcg 158


>gnl|LJGI|TC73163 similar to UniRef100_A7P1K4 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 816

 Score =  170 bits (86), Expect = 4e-42
 Identities = 89/90 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttcaaagcattcatggaggatcacaacacagccacattcccttccaaaaagtactac 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 727 atgttcaaagcattcatggaggatcacaacacagccacgttcccttccaaaaagtactac 786

                                         
Query: 61  aaccttgatgcttactataggcgtcaaatg 90
           ||||||||||||||||||||||||||||||
Sbjct: 787 aaccttgatgcttactataggcgtcaaatg 816