Miyakogusa Predicted Gene

Lj0g3v0163489.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0163489.1 tr|A9SJ85|A9SJ85_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_130836,42.86,8e-18,Sec63,Sec63 domain; no
description,NULL; SUBFAMILY NOT NAMED,NULL; HELICASE
SKI2W,NULL,CUFF.10191.1
         (375 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71258                                                      430   e-120
gnl|LJGI|TC72521                                                      264   3e-70

>gnl|LJGI|TC71258 
          Length = 636

 Score =  430 bits (217), Expect = e-120
 Identities = 224/225 (99%), Gaps = 1/225 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 ctcgatttccgaagataaaagaggagcaatggtggttaattcttggcaata-gctgtaca 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1   ctcgatttccgaagataaaagaggagcaatggtggttaattcttggcaataagctgtaca 60

                                                                       
Query: 211 tctgagttatatgctttgaaaagagtctctttttctgatcacttaaatacctccatgaag 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tctgagttatatgctttgaaaagagtctctttttctgatcacttaaatacctccatgaag 120

                                                                       
Query: 271 ttgcctctaacttcagctaatcttgaggaaatgaaacttattttagtttccgactgttac 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgcctctaacttcagctaatcttgaggaaatgaaacttattttagtttccgactgttac 180

                                                        
Query: 331 attggatttgaacaagaacactccattggggaacttgtttgatat 375
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggatttgaacaagaacactccattggggaacttgtttgatat 225


>gnl|LJGI|TC72521 
          Length = 487

 Score =  264 bits (133), Expect = 3e-70
 Identities = 136/137 (99%)
 Strand = Plus / Plus

                                                                       
Query: 239 ctttttctgatcacttaaatacctccatgaagttgcctctaacttcagctaatcttgagg 298
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   cttttgctgatcacttaaatacctccatgaagttgcctctaacttcagctaatcttgagg 62

                                                                       
Query: 299 aaatgaaacttattttagtttccgactgttacattggatttgaacaagaacactccattg 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  aaatgaaacttattttagtttccgactgttacattggatttgaacaagaacactccattg 122

                            
Query: 359 gggaacttgtttgatat 375
           |||||||||||||||||
Sbjct: 123 gggaacttgtttgatat 139