Miyakogusa Predicted Gene

Lj0g3v0163209.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0163209.1 Non Chatacterized Hit- tr|I3SA17|I3SA17_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,88.5,0,seg,NULL;
FAMILY NOT NAMED,NULL; no description,NAD(P)-binding domain;
GDHRDH,Glucose/ribitol dehydr,CUFF.10168.1
         (351 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343291 weakly similar to UniRef100_A7PZ77 Cluster: Ch...    54   6e-07
gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome...    50   9e-06

>gnl|LJGI|FS343291 weakly similar to UniRef100_A7PZ77 Cluster: Chromosome chr15
           scaffold_40, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (35%)
          Length = 731

 Score = 54.0 bits (27), Expect = 6e-07
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 17  aaaggtatgcggttgtgacaggagcaaacaagggaataggatt 59
           |||||||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 386 aaaggtatgcagttgtgactggagcaaacaaaggaattggatt 428


>gnl|LJGI|TC63326 similar to UniRef100_A7PZ77 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1052

 Score = 50.1 bits (25), Expect = 9e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 106 acagcaagagatgagaagcggggtcttgaagct 138
           |||||||||||||||||| |||||||| |||||
Sbjct: 137 acagcaagagatgagaagaggggtcttcaagct 169