Miyakogusa Predicted Gene
- Lj0g3v0163059.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0163059.1 tr|A9RAW2|A9RAW2_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,40.6,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.10862.1
(631 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77513 similar to UniRef100_A7QDV5 Cluster: Chromosome... 1106 0.0
gnl|LJGI|BW624545 weakly similar to UniRef100_A7QDV5 Cluster: Ch... 769 0.0
>gnl|LJGI|TC77513 similar to UniRef100_A7QDV5 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 1438
Score = 1106 bits (558), Expect = 0.0
Identities = 611/631 (96%), Gaps = 11/631 (1%)
Strand = Plus / Plus
Query: 1 atgtctcttcctcatcaatctctctacccacaagttcactccactaacccagacgcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgtctcttcctcatcaatctctctacccacaagttcactccactaacccagacgcaaac 132
Query: 61 tcccctttctttcacgcttcaacctcctcttcaatgtatccctcagtcggcaatcccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcccctttctttcacgcttcaacctcctcttcaatgtatccctcagtcggcaatcccacc 192
Query: 121 acggcgcagcagccatcggagcatgttctcgtcaccgtccccggcgtgattctgcatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acggcgcagcagccatcggagcatgttctcgtcaccgtccccggcgtgattctgcatctc 252
Query: 181 atagaaaaagactccagcgtccacctcgcttccggcgacctcaacataataagcctcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atagaaaaagactccagcgtccacctcgcttccggcgacctcaacataataagcctcatg 312
Query: 241 gaaggggacagagtcgtcactgttttggcctccgttggtgatcaagttcagtggccgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaaggggacagagtcgtcactgttttggcctccgttggtgatcaagttcagtggccgtta 372
Query: 301 gctaaggacgtttcagcggtgaagcttgatgactctcactatttcttcacgattagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gctaaggacgtttcagcggtgaagcttgatgactctcactatttcttcacgattagagtt 432
Query: 361 ccaaaggagggtggagagtttgaagtgctgaactatggtgtcaccgtggcagcggaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccaaaggagggtggagagtttgaagtgctgaactatggtgtcaccgtggcagcggaaggg 492
Query: 421 agaggaagagggaaggaactcgatgaggttctggagaagtactgttttctgtcggtggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agaggaagagggaaggaactcgatgaggttctggagaagtactgttttctgtcggtggag 552
Query: 481 aaggtggagggtttgggaaattgggcggtgttgaaatcagaggagaagggagtggcgggg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 553 aaggtggagggtttgggaaattgggcggtgttgaaatcagaggagaagggagtggcggtg 612
Query: 541 gaggaggaaaatgcggggtgctggctccaccgtccnccacgttggctccaaacgtggagg 600
|||||| || |||| || ||| ||||||||||||||||||||||||
Sbjct: 613 gaggagaaatcggcggcgtattgg-----------accacgttggctccaaacgtggagg 661
Query: 601 attacagcagccgtttcgcgaggtggatagc 631
|||||||||||||||||||||||||||||||
Sbjct: 662 attacagcagccgtttcgcgaggtggatagc 692
>gnl|LJGI|BW624545 weakly similar to UniRef100_A7QDV5 Cluster: Chromosome chr4
scaffold_83, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_83, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 486
Score = 769 bits (388), Expect = 0.0
Identities = 391/392 (99%)
Strand = Plus / Plus
Query: 1 atgtctcttcctcatcaatctctctacccacaagttcactccactaacccagacgcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgtctcttcctcatcaatctctctacccacaagttcactccactaacccagacgcaaac 154
Query: 61 tcccctttctttcacgcttcaacctcctcttcaatgtatccctcagtcggcaatcccacc 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tcccctttctctcacgcttcaacctcctcttcaatgtatccctcagtcggcaatcccacc 214
Query: 121 acggcgcagcagccatcggagcatgttctcgtcaccgtccccggcgtgattctgcatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 acggcgcagcagccatcggagcatgttctcgtcaccgtccccggcgtgattctgcatctc 274
Query: 181 atagaaaaagactccagcgtccacctcgcttccggcgacctcaacataataagcctcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atagaaaaagactccagcgtccacctcgcttccggcgacctcaacataataagcctcatg 334
Query: 241 gaaggggacagagtcgtcactgttttggcctccgttggtgatcaagttcagtggccgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaaggggacagagtcgtcactgttttggcctccgttggtgatcaagttcagtggccgtta 394
Query: 301 gctaaggacgtttcagcggtgaagcttgatgactctcactatttcttcacgattagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gctaaggacgtttcagcggtgaagcttgatgactctcactatttcttcacgattagagtt 454
Query: 361 ccaaaggagggtggagagtttgaagtgctgaa 392
||||||||||||||||||||||||||||||||
Sbjct: 455 ccaaaggagggtggagagtttgaagtgctgaa 486