Miyakogusa Predicted Gene

Lj0g3v0162719.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0162719.1 Non Chatacterized Hit- tr|B5TV75|B5TV75_CAMSI
Putative uncharacterized protein OS=Camellia sinensis
,46.03,1e-16,seg,NULL,CUFF.10129.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV412914                                                     430   e-120

>gnl|LJGI|AV412914 
          Length = 298

 Score =  430 bits (217), Expect = e-120
 Identities = 217/217 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagacacaacatgagacagcaagaagaggctgaagacaaccaatcaagggtgctatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  atgagacacaacatgagacagcaagaagaggctgaagacaaccaatcaagggtgctatat 141

                                                                       
Query: 61  gagctatgctccatgatcattcacactctaaagttccctccattacccttccctttccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gagctatgctccatgatcattcacactctaaagttccctccattacccttccctttccca 201

                                                                       
Query: 121 actccacatccatatccaaattcctctgctccttcctcttcttcttctctaccacccctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 actccacatccatatccaaattcctctgctccttcctcttcttcttctctaccacccctt 261

                                                
Query: 181 aagagacaacagccctggtggtggacaagtttcacat 217
           |||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagagacaacagccctggtggtggacaagtttcacat 298