Miyakogusa Predicted Gene

Lj0g3v0162189.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0162189.1 tr|A9T521|A9T521_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88177
,26.14,0.000000000002,seg,NULL,CUFF.10091.1
         (969 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80790 similar to UniRef100_A7NV49 Cluster: Chromosome...   498   e-140
gnl|LJGI|BP036127 similar to UniRef100_A7NV49 Cluster: Chromosom...    96   5e-19
gnl|LJGI|TC79431 homologue to UniRef100_A7NV49 Cluster: Chromoso...    86   5e-16

>gnl|LJGI|TC80790 similar to UniRef100_A7NV49 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 1077

 Score =  498 bits (251), Expect = e-140
 Identities = 251/251 (100%)
 Strand = Plus / Plus

                                                                       
Query: 719 cggggatgttgatgcatgagttcaggagatcgaaggtggccatggaggatctcagagggg 778
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cggggatgttgatgcatgagttcaggagatcgaaggtggccatggaggatctcagagggg 60

                                                                       
Query: 779 aattggagagaagaggagtggttatggattgggaaacagaggttggtgtgagagacagag 838
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aattggagagaagaggagtggttatggattgggaaacagaggttggtgtgagagacagag 120

                                                                       
Query: 839 tggagaatctgagagcatcttttggggttctcagatctggggcagagaacattattgctc 898
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggagaatctgagagcatcttttggggttctcagatctggggcagagaacattattgctc 180

                                                                       
Query: 899 agcttgatgatttctttgatgagattgttgaaggaaggaagaagcttttggacttttgca 958
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcttgatgatttctttgatgagattgttgaaggaaggaagaagcttttggacttttgca 240

                      
Query: 959 gccataggtaa 969
           |||||||||||
Sbjct: 241 gccataggtaa 251


>gnl|LJGI|BP036127 similar to UniRef100_A7NV49 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 503

 Score = 95.6 bits (48), Expect = 5e-19
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 808 tgggaaacagaggttggtgtgagagacagagtggagaatctgagagcatcttttggggtt 867
           |||||||  ||||||||| |||| || |||||||||||||| |||   | ||||||||| 
Sbjct: 501 tgggaaatggaggttggtttgagggagagagtggagaatctcagaatgtgttttggggtg 442

                                                                       
Query: 868 ctcagatctggggcagagaacattattgctcagcttgatgatttctttgatgagattgtt 927
           || | |||||| |||||||   || ||   ||||| ||||||||||||||||||||||| 
Sbjct: 441 ctgaaatctggtgcagagagtgttgtttgccagctagatgatttctttgatgagattgtg 382

                                                   
Query: 928 gaaggaaggaagaagcttttggacttttgcagccataggt 967
           || || ||||||||||||||||| ||||| || |||||||
Sbjct: 381 gagggtaggaagaagcttttggatttttgtagtcataggt 342


>gnl|LJGI|TC79431 homologue to UniRef100_A7NV49 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 479

 Score = 85.7 bits (43), Expect = 5e-16
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                  
Query: 758 ccatggaggatctcagaggggaattggagagaagaggagtggttatggattggga 812
           |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 153 ccatggtggatctcagaggggaattagagagaagtggagtggttatggattggga 99



 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 81/97 (83%), Gaps = 9/97 (9%)
 Strand = Plus / Minus

                                                                       
Query: 842 agaatctgagagcatcttttggggttctcagatctggggcagagaacattattgctcagc 901
           ||||| |||||| |||||| ||||||||||||||||||  |||||||||||||||     
Sbjct: 88  agaatatgagagtatcttt-ggggttctcagatctgggcaagagaacattattgc----- 35

                                                
Query: 902 ttgatgatttctttgatgagattgttgaaggaaggaa 938
              | | |||||||||||||||||||||||| |||||
Sbjct: 34  ---aggctttctttgatgagattgttgaagggaggaa 1