Miyakogusa Predicted Gene
- Lj0g3v0162139.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0162139.3 Non Chatacterized Hit- tr|I1L2P4|I1L2P4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.03,0,zf-CHY,Zinc
finger, CHY-type; Hemerythrin,Haemerythrin/HHE cation-binding motif;
zf-RING_2,Zinc fing,CUFF.10187.3
(3084 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70974 similar to UniRef100_A7P3B2 Cluster: Chromosome... 1592 0.0
gnl|LJGI|TC58628 similar to UniRef100_A7PGW1 Cluster: Chromosome... 145 2e-33
gnl|LJGI|TC71386 similar to UniRef100_A7PGW1 Cluster: Chromosome... 143 8e-33
gnl|LJGI|BP065508 similar to UniRef100_A7PGW1 Cluster: Chromosom... 103 6e-21
gnl|LJGI|BP067204 homologue to UniRef100_A7PGW1 Cluster: Chromos... 86 2e-15
>gnl|LJGI|TC70974 similar to UniRef100_A7P3B2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (22%)
Length = 1013
Score = 1592 bits (803), Expect = 0.0
Identities = 803/803 (100%)
Strand = Plus / Plus
Query: 2282 agcagaagttgtctcaagcagctggcggtgaatcttcaaacagagaagatttattggaaa 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcagaagttgtctcaagcagctggcggtgaatcttcaaacagagaagatttattggaaa 61
Query: 2342 cattaccttcatttcgtgatccagagaaaaaagtctttggttgtgagcattacaaaagaa 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cattaccttcatttcgtgatccagagaaaaaagtctttggttgtgagcattacaaaagaa 121
Query: 2402 attgcaaactccgcgctgcttgctgtgggaaactattcacgtgtaggttctgccatgatg 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 attgcaaactccgcgctgcttgctgtgggaaactattcacgtgtaggttctgccatgatg 181
Query: 2462 aagttagtgaccattcaatggataggaaggctacaaccgagatgatgtgcatgtgctgtc 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aagttagtgaccattcaatggataggaaggctacaaccgagatgatgtgcatgtgctgtc 241
Query: 2522 ttcaaatacagcctgttggaccagtttgtacaacaccttcctgtggtagtctcttaatgg 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcaaatacagcctgttggaccagtttgtacaacaccttcctgtggtagtctcttaatgg 301
Query: 2582 caaagtactattgtagtgtttgcaaattttttgatgatgaaaggacggtttatcattgcc 2641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caaagtactattgtagtgtttgcaaattttttgatgatgaaaggacggtttatcattgcc 361
Query: 2642 ctttctgcaatctatgtcgtctgggaaagggactcggtgttgacttctttcattgcatgc 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctttctgcaatctatgtcgtctgggaaagggactcggtgttgacttctttcattgcatgc 421
Query: 2702 aatgtaattgttgtttgtcaatgaaattggatgatcacctatgccgggaaaagggcttag 2761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aatgtaattgttgtttgtcaatgaaattggatgatcacctatgccgggaaaagggcttag 481
Query: 2762 aaacaaactgtcccatctgctgtgattttttgttcacatccagtgcatctgtcagagctc 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aaacaaactgtcccatctgctgtgattttttgttcacatccagtgcatctgtcagagctc 541
Query: 2822 tcccttgtggacatttcatgcattctgcttgctttcaggcatacgcatgcagccactaca 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcccttgtggacatttcatgcattctgcttgctttcaggcatacgcatgcagccactaca 601
Query: 2882 tctgtccaatctgtagcaaatctatgggggatatggcggtttactttggcatgcttgatg 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tctgtccaatctgtagcaaatctatgggggatatggcggtttactttggcatgcttgatg 661
Query: 2942 ctctattggcttctgaggagctcccagaagaatttcggaatcgacgtcaggatatacttt 3001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctctattggcttctgaggagctcccagaagaatttcggaatcgacgtcaggatatacttt 721
Query: 3002 gtaatgactgccatgagaagggtactgctccattccattggctataccacaagtgtgggt 3061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gtaatgactgccatgagaagggtactgctccattccattggctataccacaagtgtgggt 781
Query: 3062 tttgcggatcttacaacacaagg 3084
|||||||||||||||||||||||
Sbjct: 782 tttgcggatcttacaacacaagg 804
>gnl|LJGI|TC58628 similar to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 862
Score = 145 bits (73), Expect = 2e-33
Identities = 145/169 (85%)
Strand = Plus / Plus
Query: 2791 ttgttcacatccagtgcatctgtcagagctctcccttgtggacatttcatgcattctgct 2850
||||||||||| |||||| ||||||||||||| | ||||||||||| ||||||||| ||
Sbjct: 195 ttgttcacatcaagtgcaactgtcagagctctactttgtggacattacatgcattcatct 254
Query: 2851 tgctttcaggcatacgcatgcagccactacatctgtccaatctgtagcaaatctatgggg 2910
||||||||||||||| | | ||||||| ||||||||||| |||||||| ||||
Sbjct: 255 tgctttcaggcatacactgttggtcactacacatgtccaatctgcagcaaatccttggga 314
Query: 2911 gatatggcggtttactttggcatgcttgatgctctattggcttctgagg 2959
|||||||||||||||||||| |||||||||||| | |||||| ||||||
Sbjct: 315 gatatggcggtttactttggtatgcttgatgctttgttggctgctgagg 363
>gnl|LJGI|TC71386 similar to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 4206
Score = 143 bits (72), Expect = 8e-33
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 2794 ttcacatccagtgcatctgtcagagctctcccttgtggacatttcatgcattctgcttgc 2853
|||||||| ||||| | ||||||||||| |||||||| || | |||||||||||||||
Sbjct: 3591 ttcacatcaagtgctccagtcagagctctaccttgtggccactatatgcattctgcttgc 3650
Query: 2854 tttcaggcatacgcatgcagccactacatctgtccaatctgtagcaaatctatgggggat 2913
|||||||||||| | || || ||||||| ||||||||||| ||||| || |||| |||
Sbjct: 3651 tttcaggcatacacctgtagtcactacacatgtccaatctgcagcaagtcattgggagat 3710
Query: 2914 atggcggtttactttggcatgcttgatgctctattggcttctgaggagctcccagaaga 2972
||| ||||||||||||| ||||||||||| |||||||| |||||||||| || |||||
Sbjct: 3711 atgncggtttactttggtatgcttgatgccttattggctgctgaggagcttcctgaaga 3769
Score = 127 bits (64), Expect = 4e-28
Identities = 223/276 (80%)
Strand = Plus / Plus
Query: 1766 ttcagggcatgtgcaaatctatcagagtgacactagatcaacatattatcagggaagaac 1825
||||||| ||||||||||| | |||||||| || ||||| |||||| |||||||||| |
Sbjct: 2557 ttcaggggatgtgcaaatccgtaagagtgaccctggatcagcatattttcagggaagagc 2616
Query: 1826 ttgaattatggccattgtttgataaacacttttctgtggaagaacaggataaaattgttg 1885
||| | ||||||||||||| | || || |||| ||||||||||| ||||| || |
Sbjct: 2617 gtgagctctggccattgtttgggaggcatttcactgtagaagaacaggacaaaatagtag 2676
Query: 1886 gtcgtataattggtactacaggggcagaggttctccaatcaatgctgccgtgggttactt 1945
| || |||||||| |||||||| ||||| ||||||||||||||| | || ||||| ||||
Sbjct: 2677 gacgaataattggaactacaggtgcagaagttctccaatcaatgttaccatgggtaactt 2736
Query: 1946 ctgctctcacacaagatgagcaaaacaaaatgatagacacatggaagcaggctaccaaaa 2005
|||| || || || || || ||||||| |||| || |||||||||||||| || || |
Sbjct: 2737 ctgcacttactcaggaagaacaaaacacgctgatggatacatggaagcaggcgactaaga 2796
Query: 2006 acaccatgttcaatgagtggcttgatgaatggtgga 2041
| || ||||||| ||| |||||| ||||||| ||||
Sbjct: 2797 atactatgttcagtgaatggcttaatgaatgctgga 2832
Score = 119 bits (60), Expect = 1e-25
Identities = 114/132 (86%)
Strand = Plus / Plus
Query: 2146 tggaaagacatattcaggatgaaccagaatgaacttgaatcagaaataagaaaggtttct 2205
||||||||||||||| ||||||| |||||||||||||| ||||| || | || |||| |
Sbjct: 2946 tggaaagacatattccggatgaatcagaatgaacttgagtcagagatccggaaagtttat 3005
Query: 2206 agagattcaactcttgatccaagaagaaaaacatatcttattcagaatctaatgaccagt 2265
| || ||||||||||||||||| ||||| |||||||| | |||||||||||||| |||
Sbjct: 3006 cgtgactcaactcttgatccaaggagaaaggcatatcttgtgcagaatctaatgacaagt 3065
Query: 2266 cgttggatagct 2277
||||||||||||
Sbjct: 3066 cgttggatagct 3077
Score = 103 bits (52), Expect = 6e-21
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 1486 ttgtggggtttgtatagagctcatagtaatgcagaagatgatatagtatttccagcatta 1545
||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| |
Sbjct: 2271 ttgtggggtttatatagagctcatagtaatgctgaagatgacatagtatttccagcactg 2330
Query: 1546 gaatcaaaagagaatcttcacaatgtgagccattcttaca 1585
||||| |||||| ||||| |||||||| ||||| ||||
Sbjct: 2331 gaatccaaagaggcacttcataatgtgagtcattcataca 2370
Score = 63.9 bits (32), Expect = 6e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 452 ctgaagtctgcatctttcacagcattgctgaggacaaagttatattccccgctgta 507
||||||| ||||| |||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 1234 ctgaagtttgcatatttcacagtattgctgaggacaaggttatatttccagctgta 1289
>gnl|LJGI|BP065508 similar to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 377
Score = 103 bits (52), Expect = 6e-21
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 2845 tctgcttgctttcaggcatacgcatgcagccactacatctgtccaatctgtagcaaatct 2904
||||||||||||||||||||| | || || ||||||| ||||| ||||| ||| | ||
Sbjct: 377 tctgcttgctttcaggcatacacctgtagtcactacacatgtcccatctgcagccagtcc 318
Query: 2905 atgggggatatggcggtttactttggcatgcttgatgctctattggcttctgaggagctc 2964
|||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 317 ttgggagatatggcggtttactttggtatgcttgatgccttattggctgctgaggagctt 258
Query: 2965 ccagaaga 2972
|| |||||
Sbjct: 257 cctgaaga 250
>gnl|LJGI|BP067204 homologue to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 486
Score = 85.7 bits (43), Expect = 2e-15
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 2875 cactacatctgtccaatctgtagcaaatctatgggggatatggcggtttactttggcatg 2934
||||||| ||||||||||| ||||| || |||| |||||| ||||||||||||| |||
Sbjct: 435 cactacacatgtccaatctgcagcaagtcattgggagatatgncggtttactttggtatg 376
Query: 2935 cttgatgctctattggcttctgaggagctcccagaaga 2972
|||||||| |||||||| |||||||||| || |||||
Sbjct: 375 cttgatgccttattggctgctgaggagcttcctgaaga 338