Miyakogusa Predicted Gene

Lj0g3v0162139.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0162139.1 Non Chatacterized Hit- tr|E1ZNF1|E1ZNF1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,27.55,2e-18,Hemerythrin,Haemerythrin/HHE cation-binding
motif; RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING,CUFF.10187.1
         (1653 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71386 similar to UniRef100_A7PGW1 Cluster: Chromosome...   103   3e-21

>gnl|LJGI|TC71386 similar to UniRef100_A7PGW1 Cluster: Chromosome chr17 scaffold_16,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_16, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (86%)
          Length = 4206

 Score =  103 bits (52), Expect = 3e-21
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1486 ttgtggggtttgtatagagctcatagtaatgcagaagatgatatagtatttccagcatta 1545
            ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| | 
Sbjct: 2271 ttgtggggtttatatagagctcatagtaatgctgaagatgacatagtatttccagcactg 2330

                                                    
Query: 1546 gaatcaaaagagaatcttcacaatgtgagccattcttaca 1585
            ||||| ||||||   ||||| |||||||| ||||| ||||
Sbjct: 2331 gaatccaaagaggcacttcataatgtgagtcattcataca 2370



 Score = 63.9 bits (32), Expect = 3e-09
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 452  ctgaagtctgcatctttcacagcattgctgaggacaaagttatattccccgctgta 507
            ||||||| ||||| |||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 1234 ctgaagtttgcatatttcacagtattgctgaggacaaggttatatttccagctgta 1289