Miyakogusa Predicted Gene

Lj0g3v0162109.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0162109.1 tr|G7JZH2|G7JZH2_MEDTR Leucine-rich repeat
receptor-like protein kinase OS=Medicago truncatula
GN=MT,71.97,0,seg,NULL; L domain-like,NULL; Protein kinase-like
(PK-like),Protein kinase-like domain; PROTEIN_KINA,CUFF.10085.1
         (1233 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71828 similar to UniRef100_A7P3B8 Cluster: Chromosome...   480   e-134
gnl|LJGI|BP055837 similar to UniRef100_A7P3B8 Cluster: Chromosom...   216   2e-55
gnl|LJGI|TC82771 homologue to UniRef100_Q1SN29 Cluster: Protein ...    56   5e-07
gnl|LJGI|TC80663 similar to UniRef100_Q1SN29 Cluster: Protein ki...    54   2e-06

>gnl|LJGI|TC71828 similar to UniRef100_A7P3B8 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 702

 Score =  480 bits (242), Expect = e-134
 Identities = 242/242 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagactcctcttcctctcccacaacaacttctccggtgacttccccgtcacgctcacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atgagactcctcttcctctcccacaacaacttctccggtgacttccccgtcacgctcacc 520

                                                                       
Query: 61  tccctcacccgcctctaccgccttgacctctcccacaacagcctctccggcgagattccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tccctcacccgcctctaccgccttgacctctcccacaacagcctctccggcgagattccg 580

                                                                       
Query: 121 gccgccgtaaacaacttcacgcggctcctcacactccgccttgatggtaaccaactccac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gccgccgtaaacaacttcacgcggctcctcacactccgccttgatggtaaccaactccac 640

                                                                       
Query: 181 ggccgcattccgaacatgaacttccccaacctccaagacttcaacgtctccggtaacaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggccgcattccgaacatgaacttccccaacctccaagacttcaacgtctccggtaacaat 700

             
Query: 241 ct 242
           ||
Sbjct: 701 ct 702


>gnl|LJGI|BP055837 similar to UniRef100_A7P3B8 Cluster: Chromosome chr1 scaffold_5,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_5, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (19%)
          Length = 528

 Score =  216 bits (109), Expect = 2e-55
 Identities = 109/109 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1125 actgggagattcaacggttaccgcgcaccggaggcctcggatggccggaaacagtcctgg 1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528  actgggagattcaacggttaccgcgcaccggaggcctcggatggccggaaacagtcctgg 469

                                                             
Query: 1185 aagtctgacgtgtactccttcggcgttttgctcatggagatgctgactg 1233
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468  aagtctgacgtgtactccttcggcgttttgctcatggagatgctgactg 420


>gnl|LJGI|TC82771 homologue to UniRef100_Q1SN29 Cluster: Protein kinase; n=1;
           Medicago truncatula|Rep: Protein kinase - Medicago
           truncatula (Barrel medic), partial (25%)
          Length = 586

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 692 tggaggatcttcttcgtgcctcggcggagatgctggggaa 731
           ||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 179 tggaggatcttctccgtgcttcggcggagatgctcgggaa 218


>gnl|LJGI|TC80663 similar to UniRef100_Q1SN29 Cluster: Protein kinase; n=1; Medicago
           truncatula|Rep: Protein kinase - Medicago truncatula
           (Barrel medic), partial (43%)
          Length = 1180

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 684 gtttgagctggaggatcttcttcgtgcctcggcggagatgctggggaaagg 734
           |||||||||||||||||| |||   || |||||||||||||| ||||||||
Sbjct: 151 gtttgagctggaggatctgcttaaagcttcggcggagatgctcgggaaagg 201