Miyakogusa Predicted Gene

Lj0g3v0162099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0162099.1 tr|Q3LWG8|Q3LWG8_BIGNA Morn repeat protein 1
OS=Bigelowiella natans GN=mrp1 PE=4
SV=1,48.78,0.99,seg,NULL,CUFF.10083.1
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593499 weakly similar to UniRef100_A7PQJ5 Cluster: Ch...   634   0.0  

>gnl|LJGI|DC593499 weakly similar to UniRef100_A7PQJ5 Cluster: Chromosome chr6
           scaffold_25, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 420

 Score =  634 bits (320), Expect = 0.0
 Identities = 320/320 (100%)
 Strand = Plus / Plus

                                                                       
Query: 86  acggcgaagaagtcgacgacccagaattccgccgcgccttcagcttccgccgcggcgacg 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 acggcgaagaagtcgacgacccagaattccgccgcgccttcagcttccgccgcggcgacg 160

                                                                       
Query: 146 agcctctccgcccggccgacccggagaccaacttcaaggacttcgctgaagtcctcgaca 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 agcctctccgcccggccgacccggagaccaacttcaaggacttcgctgaagtcctcgaca 220

                                                                       
Query: 206 gcagcgtggttcaggaggttcgggatgaagatgaccctgcgtttgtggaggactacaacc 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gcagcgtggttcaggaggttcgggatgaagatgaccctgcgtttgtggaggactacaacc 280

                                                                       
Query: 266 cctttgacttcccgccggaccctgagaactgggcggaggaggatttgagggagctttggg 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cctttgacttcccgccggaccctgagaactgggcggaggaggatttgagggagctttggg 340

                                                                       
Query: 326 ctgatgggccgaaggaaattggtgggactggttgggaccctgcttgggttgaacaggatg 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ctgatgggccgaaggaaattggtgggactggttgggaccctgcttgggttgaacaggatg 400

                               
Query: 386 agtgggagtatgtgttggag 405
           ||||||||||||||||||||
Sbjct: 401 agtgggagtatgtgttggag 420



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 1  atggccaccaatgctgacccaaaaacc 27
          |||||||||||||||||||||||||||
Sbjct: 16 atggccaccaatgctgacccaaaaacc 42