Miyakogusa Predicted Gene

Lj0g3v0161989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0161989.1 tr|Q9T062|Q9T062_ARATH BZIP transcription
factor-like protein OS=Arabidopsis thaliana GN=AT4g37730
P,35.89,2e-19,no description,NULL; BZIP,Basic-leucine zipper domain;
CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED,CUFF.10072.1
         (541 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80980 similar to UniRef100_Q6P9R1 Cluster: ATP-depend...   402   e-112

>gnl|LJGI|TC80980 similar to UniRef100_Q6P9R1 Cluster: ATP-dependent RNA helicase
           DDX51; n=1; Mus musculus|Rep: ATP-dependent RNA helicase
           DDX51 - Mus musculus (Mouse), partial (3%)
          Length = 249

 Score =  402 bits (203), Expect = e-112
 Identities = 203/203 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctttccgccattcttccctccgaccctcttctcagcaacccattctccgccttcgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  atgctttccgccattcttccctccgaccctcttctcagcaacccattctccgccttcgcc 106

                                                                       
Query: 61  ggcggtttcacgccgccgtgggactgccacgatgaccccttatccgattacctcaaaccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ggcggtttcacgccgccgtgggactgccacgatgaccccttatccgattacctcaaaccc 166

                                                                       
Query: 121 agtactgaacccaaaccggtaacttcaagttccggttctggcggaccgatcctaacccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 agtactgaacccaaaccggtaacttcaagttccggttctggcggaccgatcctaacccat 226

                                  
Query: 181 gagaaacgtaaaccggacccgga 203
           |||||||||||||||||||||||
Sbjct: 227 gagaaacgtaaaccggacccgga 249