Miyakogusa Predicted Gene
- Lj0g3v0161879.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0161879.1 tr|I1JBK0|I1JBK0_SOYBN Pectinesterase OS=Glycine
max PE=3 SV=1,84.62,0,PME_inhib: pectinesterase inhibitor
domain,Pectinesterase inhibitor; SUBFAMILY NOT NAMED,NULL;
FAMIL,CUFF.10066.1
(1683 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74901 similar to UniRef100_Q9M5J0 Cluster: Pectin met... 936 0.0
gnl|LJGI|AV426324 similar to UniRef100_A7Q0F8 Cluster: Chromosom... 771 0.0
gnl|LJGI|FS359482 similar to UniRef100_Q9M5J0 Cluster: Pectin me... 254 2e-66
gnl|LJGI|BP039243 weakly similar to UniRef100_P85076 Cluster: Pe... 147 3e-34
gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin met... 92 1e-17
gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome... 82 1e-14
gnl|LJGI|FS332965 similar to UniRef100_A7Q0F8 Cluster: Chromosom... 80 5e-14
gnl|LJGI|TC69590 similar to UniRef100_A7PYC6 Cluster: Chromosome... 72 1e-11
gnl|LJGI|AU089161 similar to UniRef100_A7NVZ1 Cluster: Chromosom... 70 5e-11
gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectineste... 64 3e-09
gnl|LJGI|TC60009 similar to UniRef100_Q43062 Cluster: Pectineste... 54 3e-06
>gnl|LJGI|TC74901 similar to UniRef100_Q9M5J0 Cluster: Pectin methylesterase isoform
alpha; n=1; Vigna radiata var. radiata|Rep: Pectin
methylesterase isoform alpha - Phaseolus aureus (Mung
bean) (Vigna radiata), partial (54%)
Length = 755
Score = 936 bits (472), Expect = 0.0
Identities = 472/472 (100%)
Strand = Plus / Plus
Query: 1212 agtattccaaaactgcaacctatacgcacgtaaaccgaatgataatcagaagaacatgtt 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtattccaaaactgcaacctatacgcacgtaaaccgaatgataatcagaagaacatgtt 60
Query: 1272 caccgcacagggaagagaggatcctaaccaaaacactgggatatcaatcttgaactgcaa 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caccgcacagggaagagaggatcctaaccaaaacactgggatatcaatcttgaactgcaa 120
Query: 1332 ggttgcagctgctgcagatttgatacctgtgaagtcgacgttcaagagctaccttggtcg 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttgcagctgctgcagatttgatacctgtgaagtcgacgttcaagagctaccttggtcg 180
Query: 1392 tccatggaaactgtattcgaggacggtttttctgaagtcttacatggaggatttgattga 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccatggaaactgtattcgaggacggtttttctgaagtcttacatggaggatttgattga 240
Query: 1452 tcctgctgggtggttggaatggaatgacacgtttgcgttggatacgttgtattatgggga 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcctgctgggtggttggaatggaatgacacgtttgcgttggatacgttgtattatgggga 300
Query: 1512 atatcagaatcggggtccgggttcaaacactagtgcaagagttaagtggggtggttatag 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atatcagaatcggggtccgggttcaaacactagtgcaagagttaagtggggtggttatag 360
Query: 1572 ggtcattaatagttcaactgaggcaagtcagtttacagttgggcagtttatacaagggag 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtcattaatagttcaactgaggcaagtcagtttacagttgggcagtttatacaagggag 420
Query: 1632 tgattggttgaactccactggcattcccttctactttaatttgagttgagtg 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgattggttgaactccactggcattcccttctactttaatttgagttgagtg 472
>gnl|LJGI|AV426324 similar to UniRef100_A7Q0F8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 393
Score = 771 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 385 ctggagctcaaaaccaccatttccgacctctccaaagccacaataggctccaagaggcgc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggagctcaaaaccaccatttccgacctctccaaagccacaataggctccaagaggcgc 60
Query: 445 catgacttgcagacattgttaagcggcgccatgactaacttgtacacttgccttgacggt 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgacttgcagacattgttaagcggcgccatgactaacttgtacacttgccttgacggt 120
Query: 505 tttgcttacagcaaagggaacgtgagaaggagaattgagaagaagctgattcggatatcg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgcttacagcaaagggaacgtgagaaggagaattgagaagaagctgattcggatatcg 180
Query: 565 cgtcatgttagcaacgctttggcaatgttcaagaaagttcctcaagtgaaggaaaaaatg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtcatgttagcaacgctttggcaatgttcaagaaagttcctcaagtgaaggaaaaaatg 240
Query: 625 tctgagaatgatgaggtttttcctgaatatggtaaaatgaaaaacgggtttccttcttgg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctgagaatgatgaggtttttcctgaatatggtaaaatgaaaaacgggtttccttcttgg 300
Query: 685 gtttccaacaaagacagaaagcttcttcaagcttctgtgagtgagactaagtttgatctt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttccaacaaagacagaaagcttcttcaagcttctgtgagtgagactaagtttgatctt 360
Query: 745 gttgttgctaaagatggtagtgggaattttact 777
|||| ||||||||||||||||||||||||||||
Sbjct: 361 gttgatgctaaagatggtagtgggaattttact 393
>gnl|LJGI|FS359482 similar to UniRef100_Q9M5J0 Cluster: Pectin methylesterase isoform
alpha; n=1; Vigna radiata var. radiata|Rep: Pectin
methylesterase isoform alpha - Phaseolus aureus (Mung
bean) (Vigna radiata), partial (47%)
Length = 683
Score = 254 bits (128), Expect = 2e-66
Identities = 329/396 (83%)
Strand = Plus / Minus
Query: 1285 agagaggatcctaaccaaaacactgggatatcaatcttgaactgcaaggttgcagctgct 1344
||||| ||||| ||||| ||||||||||| || |||||||| ||||||||||| || |||
Sbjct: 680 agagaagatccaaaccagaacactgggatttccatcttgaattgcaaggttgctgcggct 621
Query: 1345 gcagatttgatacctgtgaagtcgacgttcaagagctaccttggtcgtccatggaaactg 1404
||||||||||| || |||||| || |||||||||| ||||| ||| | || ||||| |
Sbjct: 620 gcagatttgatcccggtgaaggcgtcgttcaagagttacctgggtaggccttggaagaag 561
Query: 1405 tattcgaggacggtttttctgaagtcttacatggaggatttgattgatcctgctgggtgg 1464
|||||||| |||||||||||||| |||||||| |||||||||||||| |||| |||||||
Sbjct: 560 tattcgagaacggtttttctgaattcttacatagaggatttgattgaccctgttgggtgg 501
Query: 1465 ttggaatggaatgacacgtttgcgttggatacgttgtattatggggaatatcagaatcgg 1524
||||||||| ||| |||||||| |||||||| ||||||||||||| || |||| |
Sbjct: 500 ttggaatgggatggaacgtttgcattggatactctgtattatggggagtacaagaacaga 441
Query: 1525 ggtccgggttcaaacactagtgcaagagttaagtggggtggttatagggtcattaatagt 1584
|| || ||||| || || ||||| ||||||| ||| ||||||| |||||| | ||||
Sbjct: 440 ggacctggttccaatacaagtgctagagttacatggccgggttataaggtcatcagtagt 381
Query: 1585 tcaactgaggcaagtcagtttacagttgggcagtttatacaagggagtgattggttgaac 1644
|| |||||||||||||| || ||||||||| |||| |||||||| | | ||||||||| |
Sbjct: 380 tctactgaggcaagtcaattcacagttggggagttcatacaaggtaataattggttgagc 321
Query: 1645 tccactggcattcccttctactttaatttgagttga 1680
|| ||||| ||||| |||| || | ||||||||||
Sbjct: 320 tctactggaattccattcttctctggtttgagttga 285
>gnl|LJGI|BP039243 weakly similar to UniRef100_P85076 Cluster: Pectinesterase; n=1;
Actinidia deliciosa|Rep: Pectinesterase - Actinidia
deliciosa (Kiwi), partial (26%)
Length = 447
Score = 147 bits (74), Expect = 3e-34
Identities = 155/182 (85%)
Strand = Plus / Minus
Query: 802 gctcctaactctagcactaccaggtttgcgatacacataaaagctggggcgtactttgag 861
||||||||||| || | || ||||||| |||||||||||||||||||| |||||||||
Sbjct: 380 gctcctaactcccgcgccactaggtttgttatacacataaaagctggggcttactttgag 321
Query: 862 aatgtggaggtgatcaggaagaagagcaatctggtgtttgtaggagatgggattggaaag 921
|| ||||||||||| |||||||||| ||| || ||||||| ||||||||||||||||||
Sbjct: 320 aacgtggaggtgataaggaagaagacgaatgtgatgtttgtgggagatgggattggaaag 261
Query: 922 acggtggtgaaagctagtaggaatgttgtggatggctggactactttccaatcagctact 981
|| || ||||| || |||||||| |||||||||||||| || || | ||||||||||
Sbjct: 260 actgttgtgaaggcccacaggaatgtcgtggatggctggaccacctttccatcagctact 201
Query: 982 gt 983
||
Sbjct: 200 gt 199
>gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
communis (Pear), partial (40%)
Length = 825
Score = 91.7 bits (46), Expect = 1e-17
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 1153 ttctaccgcgagtgcgacatctacggcaccgtggacttcatcttcggcaacgccgccgca 1212
|||||||||||||| ||||||||||||||||| |||||||| ||| |||| ||||| | |
Sbjct: 681 ttctaccgcgagtgtgacatctacggcaccgtagacttcatattcagcaatgccgcggta 740
Query: 1213 gtattccaaaactgcaacctatacgc 1238
|| ||||||||||||| ||| |||||
Sbjct: 741 gttttccaaaactgcagcctctacgc 766
>gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 1064
Score = 81.8 bits (41), Expect = 1e-14
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 1079 ccgacttctccgccttctacaaatgcagcttcgttggctaccaagacaccctctacgtcc 1138
|||||||||| | ||||||| ||||||||| | |||||| ||||| |||||||| |
Sbjct: 226 ccgacttctcagttttctacaggtgcagcttcaaagcctaccaggacactctctacgtgc 285
Query: 1139 actccctccgccagttctaccgcgagtgcgacatctacggcaccgtggacttcatcttcg 1198
||||| |||||| ||||||||||| ||| |||| ||||||||| | ||||||||||| |
Sbjct: 286 actccaaccgccaattctaccgcgactgccacatatacggcaccatagacttcatctttg 345
Query: 1199 gcaacgccgccgcagtattccaaaactgc 1227
| ||||||| ||||| | |||||||||
Sbjct: 346 gggacgccgcagcagttctgcaaaactgc 374
>gnl|LJGI|FS332965 similar to UniRef100_A7Q0F8 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 782
Score = 79.8 bits (40), Expect = 5e-14
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 151 tccacatgccaaggaacactctacccagacctatgtgtctccaccctcaccacattccca 210
||||||||| ||||||||||||||||||| ||||| ||||| || | || | ||||||
Sbjct: 206 tccacatgcgaaggaacactctacccagaactatgcgtctcaactttatcctccttccca 265
Query: 211 gatctcaccttaaaatctgtcccacaaatgat 242
|||||||||| |||||| |||||||||||||
Sbjct: 266 gatctcacctcaaaatccctcccacaaatgat 297
Score = 56.0 bits (28), Expect = 7e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 646 cctgaatatggtaaaatgaaaaacgggtttccttcttgggtttccaacaaagacagaaag 705
|||||||||||||| ||||| | |||||||| |||||||||||| |||||||| |||
Sbjct: 701 cctgaatatggtaagttgaaagatgggtttccatcttgggtttcccctaaagacaggaag 760
Query: 706 cttcttcaagct 717
|| || ||||||
Sbjct: 761 ctactacaagct 772
>gnl|LJGI|TC69590 similar to UniRef100_A7PYC6 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 902
Score = 71.9 bits (36), Expect = 1e-11
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 1096 tacaaatgcagcttcgttggctaccaagacaccctctacgtccactccctccgccagttc 1155
|||| ||||||||| | |||||||||||||| ||||| ||||| ||| | | || |||
Sbjct: 131 tacagatgcagctttgaaggctaccaagacacactctatgtccattccgacagacaattc 190
Query: 1156 taccgcgagtgcgacatctacggcaccgtggacttcatcttcggcaacgccgccgcagta 1215
||| | || ||| ||||||||||||| || |||||||| ||||| ||||| || || |||
Sbjct: 191 tacagagaatgcaacatctacggcacagttgacttcatattcggtaacgcggctgccgta 250
Query: 1216 ttccaaaa 1223
||||||||
Sbjct: 251 ttccaaaa 258
>gnl|LJGI|AU089161 similar to UniRef100_A7NVZ1 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 435
Score = 69.9 bits (35), Expect = 5e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 1114 ggctaccaagacaccctctacgtccactccctccgccagttctaccgcgagtgcgacatc 1173
||||| ||||||||| | || | |||| ||| ||||||||||||||| | ||||| |||
Sbjct: 296 ggctatcaagacaccttatatgcccacgcccaccgccagttctaccgaaactgcgaaatc 355
Query: 1174 tacggcaccgtggacttcatcttcggc 1200
| |||||| ||||||||||||||||||
Sbjct: 356 tccggcacggtggacttcatcttcggc 382
>gnl|LJGI|TC71544 similar to UniRef100_Q43111 Cluster: Pectinesterase-3 precursor; n=1;
Phaseolus vulgaris|Rep: Pectinesterase-3 precursor -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(34%)
Length = 773
Score = 63.9 bits (32), Expect = 3e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 1114 ggctaccaagacaccctctacgtccactccctccgccagttctaccgcgagtgcgacatc 1173
|||| ||||||||||||||||| || ||| |||||| ||||||||||| || ||||||
Sbjct: 72 ggcttccaagacaccctctacgcacattccaaccgccaattctaccgcgaatgtgacatc 131
Query: 1174 tacggcaccgtggacttcatcttcggcaacgccgccgcagtattccaaaactgcaa 1229
|||||| | |||||||| |||||||| || || || | ||||||||||||||
Sbjct: 132 actggcaccatagacttcatattcggcaatgcagcttcaattttccaaaactgcaa 187
>gnl|LJGI|TC60009 similar to UniRef100_Q43062 Cluster: Pectinesterase PPE8B precursor;
n=1; Prunus persica|Rep: Pectinesterase PPE8B precursor -
Prunus persica (Peach), partial (73%)
Length = 1796
Score = 54.0 bits (27), Expect = 3e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1001 gattcatagcaaaaggcataaccttcgagaactcagccggcccggaaaaacaccaagccg 1060
||||||||||| |||||| |||||| ||||| | || ||||| || ||||||||||| |
Sbjct: 925 gattcatagcacgaggcatcaccttccagaacacggcaggcccagagaaacaccaagcag 984
Query: 1061 tagccct 1067
|||||||
Sbjct: 985 tagccct 991
Score = 54.0 bits (27), Expect = 3e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 1176 cggcaccgtggacttcatcttcggcaacgccgccgcagtattccaaaactgcaac 1230
|||||| ||||| |||||||| ||| ||||| |||| || |||||||||||||||
Sbjct: 1100 cggcacggtggatttcatctttggcgacgccaccgccgtcttccaaaactgcaac 1154