Miyakogusa Predicted Gene
- Lj0g3v0161759.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0161759.4 tr|D3GBU9|D3GBU9_LOTJA YABBY1 protein OS=Lotus
japonicus GN=YABBY1 PE=2 SV=1,97.13,0,SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; YABBY,YABBY protein,CUFF.10062.4
(663 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74765 similar to UniRef100_A7QVD4 Cluster: Chromosome... 1104 0.0
gnl|LJGI|TC71034 similar to UniRef100_A7QVD4 Cluster: Chromosome... 1084 0.0
gnl|LJGI|TC74663 homologue to UniRef100_A7QVD4 Cluster: Chromoso... 442 e-123
gnl|LJGI|BP041062 homologue to UniRef100_Q6SS00 Cluster: YABBY-l... 115 4e-25
>gnl|LJGI|TC74765 similar to UniRef100_A7QVD4 Cluster: Chromosome chr2 scaffold_187,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_187, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 742
Score = 1104 bits (557), Expect = 0.0
Identities = 568/571 (99%), Gaps = 3/571 (0%)
Strand = Plus / Plus
Query: 1 atgtcatcatccaactcttctaccacactatcactggaccaccaactccctccttccgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atgtcatcatccaactcttctaccacactatcactggaccaccaactccctccttccgag 231
Query: 61 caactttgttatgtccattgcaacatatgtgacaccatcctagctgtgagtgttcctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 caactttgttatgtccattgcaacatatgtgacaccatcctagctgtgagtgttcctagc 291
Query: 121 actagcttgttcaagactgtgactgtgagatgtggtcattgcactaacctccttccggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 actagcttgttcaagactgtgactgtgagatgtggtcattgcactaacctccttccggtg 351
Query: 181 aacatgagggcattgctgctgccatcacccaatcaatttcatttgggtcactctttcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aacatgagggcattgctgctgccatcacccaatcaatttcatttgggtcactctttcttc 411
Query: 241 tccccaccccataaccttctgggggagatgccaaacccgtctccaaattttcttatgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tccccaccccataaccttctgggggagatgccaaacccgtctccaaattttcttatgaac 471
Query: 301 cacacaaatgcaacaagtaacttctctcagttctctgtgcctgctagatctgcagctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cacacaaatgcaacaagtaacttctctcagttctctgtgcctgctagatctgcagctgat 531
Query: 361 gagcttcccaggccaccgatcataaatagac---ctccagagaagagacagagagttccc 417
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 532 gagcttcccaggccaccgatcataaatagaccagctccagagaagagacagagagttccc 591
Query: 418 tcagcatacaaccgcttcattaaggacgagatccaacgcatcaagtctgtcaatcctgat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcagcatacaaccgcttcattaaggacgagatccaacgcatcaagtctgtcaatcctgat 651
Query: 478 attactcacagggaagccttcagtgcagctgctaaaaattgggcccacttcccgcacatc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 attactcacagggaagccttcagtgcagctgctaaaaattgggcccacttcccgcacatc 711
Query: 538 cactttggtctcatgcctgatcagactatga 568
|||||||||||||||||||||||||||||||
Sbjct: 712 cactttggtctcatgcctgatcagactatga 742
>gnl|LJGI|TC71034 similar to UniRef100_A7QVD4 Cluster: Chromosome chr2 scaffold_187,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_187, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 896
Score = 1084 bits (547), Expect = 0.0
Identities = 558/561 (99%), Gaps = 3/561 (0%)
Strand = Plus / Plus
Query: 106 gtgagtgttcctagcactagcttgttcaagactgtgactgtgagatgtggtcattgcact 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gtgagtgttcctagcactagcttgttcaagactgtgactgtgagatgtggtcattgcact 168
Query: 166 aacctccttccggtgaacatgagggcattgctgctgccatcacccaatcaatttcatttg 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aacctccttccggtgaacatgagggcattgctgctgccatcacccaatcaatttcatttg 228
Query: 226 ggtcactctttcttctccccaccccataaccttctgggggagatgccaaacccgtctcca 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggtcactctttcttctccccaccccataaccttctgggggagatgccaaacccgtctcca 288
Query: 286 aattttcttatgaaccacacaaatgcaacaagtaacttctctcagttctctgtgcctgct 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aattttcttatgaaccacacaaatgcaacaagtaacttctctcagttctctgtgcctgct 348
Query: 346 agatctgcagctgatgagcttcccaggccaccgatcataaatagac---ctccagagaag 402
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 349 agatctgcagctgatgagcttcccaggccaccgatcataaatagaccagctccagagaag 408
Query: 403 agacagagagttccctcagcatacaaccgcttcattaaggacgagatccaacgcatcaag 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agacagagagttccctcagcatacaaccgcttcattaaggacgagatccaacgcatcaag 468
Query: 463 tctgtcaatcctgatattactcacagggaagccttcagtgcagctgctaaaaattgggcc 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tctgtcaatcctgatattactcacagggaagccttcagtgcagctgctaaaaattgggcc 528
Query: 523 cacttcccgcacatccactttggtctcatgcctgatcagactatgaagaagacaactgtg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cacttcccgcacatccactttggtctcatgcctgatcagactatgaagaagacaactgtg 588
Query: 583 tgccagcaggaaggagaggaggttctcatgatgaaagatgggttttatgcttcagctaat 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgccagcaggaaggagaggaggttctcatgatgaaagatgggttttatgcttcagctaat 648
Query: 643 gttggtgtttcaccctactaa 663
|||||||||||||||||||||
Sbjct: 649 gttggtgtttcaccctactaa 669
>gnl|LJGI|TC74663 homologue to UniRef100_A7QVD4 Cluster: Chromosome chr2
scaffold_187, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_187, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 675
Score = 442 bits (223), Expect = e-123
Identities = 260/273 (95%), Gaps = 7/273 (2%)
Strand = Plus / Plus
Query: 398 agaagagacagagagttccctcagcatacaaccgcttcattaaggacgagatccaacgca 457
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 242 agaagaggcagagagttccctcagcatacaaccgcttcattaaggatgagatccaacgca 301
Query: 458 tcaagtctgtcaatcctgatattactcacagggaagccttcagtgcagctgctaaaaatt 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcaagtctgtcaatcctgatattactcacagggaagccttcagtgcagctgctaaaaatt 361
Query: 518 gggcccacttcccgcacatccactttggtctcatgcctgatcagactatgaagaagacaa 577
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 362 gggcccacttcccgcacatccactatggtctcatgcctgatcagactatgaggaagacaa 421
Query: 578 ctgtgtgccagcaggaaggagaggaggttctcatgatgaaagatggg-------ttttat 630
||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 422 ctgtgtgccagcaggaaggagaggatgttctcatgatgaaagatgggctttagcctttat 481
Query: 631 gcttcagctaatgttggtgtttcaccctactaa 663
|||||||||||||||||||||||||||||||||
Sbjct: 482 gcttcagctaatgttggtgtttcaccctactaa 514
>gnl|LJGI|BP041062 homologue to UniRef100_Q6SS00 Cluster: YABBY-like transcription
factor GRAMINIFOLIA; n=1; Antirrhinum majus|Rep:
YABBY-like transcription factor GRAMINIFOLIA -
Antirrhinum majus (Garden snapdragon), partial (46%)
Length = 550
Score = 115 bits (58), Expect = 4e-25
Identities = 142/170 (83%)
Strand = Plus / Minus
Query: 388 agacctccagagaagagacagagagttccctcagcatacaaccgcttcattaaggacgag 447
||||||||||||||||||||||||||||| || || |||||||||||||| ||||| |||
Sbjct: 427 agacctccagagaagagacagagagttccatctgcttacaaccgcttcatcaaggatgag 368
Query: 448 atccaacgcatcaagtctgtcaatcctgatattactcacagggaagccttcagtgcagct 507
|||||||| ||||| ||| ||||||||||| | ||||| || || || ||||| |||
Sbjct: 367 atccaacgtatcaaagctgggaatcctgatatcagccacagagaggcttttagtgctgct 308
Query: 508 gctaaaaattgggcccacttcccgcacatccactttggtctcatgcctga 557
|| || ||||||||||| || || ||||| || || || || ||||||||
Sbjct: 307 gcaaagaattgggcccattttccacacattcatttcggacttatgcctga 258