Miyakogusa Predicted Gene

Lj0g3v0161589.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0161589.1 Non Chatacterized Hit- tr|I3ST46|I3ST46_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,84.21,9e-17,seg,NULL; SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT
SEC11,Peptidase S26B, eukaryotic signal peptida,CUFF.10032.1
         (183 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59248 homologue to UniRef100_A7QIR3 Cluster: Chromoso...   184   1e-46

>gnl|LJGI|TC59248 homologue to UniRef100_A7QIR3 Cluster: Chromosome chr9
           scaffold_104, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 765

 Score =  184 bits (93), Expect = 1e-46
 Identities = 129/141 (91%)
 Strand = Plus / Plus

                                                                       
Query: 22  caggtcctcagccagggtgttactctcggcatgattgtcacgtctgcactaataatttgg 81
           |||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 132 caggtcctcacccaggctgttactctcggtatgattgtcacatctgcactaataatatgg 191

                                                                       
Query: 82  aaggcgttgatgtgcatcactggcagtgaatcacctgttgtcgttgttctttctgaaagc 141
           ||||||||||||||  |||||||||||||||| |||||||||||||||||||||| ||| 
Sbjct: 192 aaggcgttgatgtgtgtcactggcagtgaatcgcctgttgtcgttgttctttctggaagt 251

                                
Query: 142 atggaaccggggttcaagcgg 162
           |||||||| || |||||||||
Sbjct: 252 atggaaccaggattcaagcgg 272