Miyakogusa Predicted Gene

Lj0g3v0161279.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0161279.1 Non Chatacterized Hit- tr|C6TEX3|C6TEX3_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,55.56,2e-19,"Winged helix" DNA-binding domain,NULL;
Dimerisation,Plant methyltransferase dimerisation; no
descri,CUFF.10009.1
         (273 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59462 similar to UniRef100_Q06YR2 Cluster: IOMT 4; n=...   541   e-154
gnl|LJGI|AV427028 weakly similar to UniRef100_A7PJB6 Cluster: Ch...    54   4e-07

>gnl|LJGI|TC59462 similar to UniRef100_Q06YR2 Cluster: IOMT 4; n=1; Medicago
           truncatula|Rep: IOMT 4 - Medicago truncatula (Barrel
           medic), partial (93%)
          Length = 1277

 Score =  541 bits (273), Expect = e-154
 Identities = 273/273 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttcagccaatggcctagacgcatctgaactctttgaaggccaagctctgttatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52  atgggttcagccaatggcctagacgcatctgaactctttgaaggccaagctctgttatac 111

                                                                       
Query: 61  atgaacatgtttggcttcctacaaaccatgtctctcaaatgggctatgcaacaaggcata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atgaacatgtttggcttcctacaaaccatgtctctcaaatgggctatgcaacaaggcata 171

                                                                       
Query: 121 gcagacatcatatacaaccatggcaaacccatcactttcactgagctggtcacaaccctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gcagacatcatatacaaccatggcaaacccatcactttcactgagctggtcacaaccctg 231

                                                                       
Query: 181 caaattccaccagccaaaaccagtttggtgaagcgactgatgcgatttctgggacacaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 caaattccaccagccaaaaccagtttggtgaagcgactgatgcgatttctgggacacaat 291

                                            
Query: 241 ggaatcttcgcgatcgccggcgaagaagaagaa 273
           |||||||||||||||||||||||||||||||||
Sbjct: 292 ggaatcttcgcgatcgccggcgaagaagaagaa 324


>gnl|LJGI|AV427028 weakly similar to UniRef100_A7PJB6 Cluster: Chromosome chr12
           scaffold_18, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 393

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 114 aggcatagcagacatcatatacaaccatggcaaacccat 152
           |||||||||||| |||||| ||||| |||||||||||||
Sbjct: 21  aggcatagcagatatcatacacaactatggcaaacccat 59