Miyakogusa Predicted Gene
- Lj0g3v0160869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0160869.1 tr|Q6QD72|Q6QD72_NICBE MYB1 (Fragment)
OS=Nicotiana benthamiana PE=2
SV=1,57.5,6e-19,Homeodomain-like,Homeodomain-like; no
description,Homeodomain-like; Myb_DNA-binding,SANT/Myb
domain;,CUFF.9983.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV766688 similar to UniRef100_Q0PJC1 Cluster: MYB trans... 682 0.0
gnl|LJGI|TC78235 homologue to UniRef100_Q4LDB1 Cluster: Protein ... 498 e-140
gnl|LJGI|TC69448 similar to UniRef100_Q0PJC1 Cluster: MYB transc... 327 6e-89
gnl|LJGI|BP077502 218 4e-56
gnl|LJGI|TC75727 similar to UniRef100_Q0PJC1 Cluster: MYB transc... 184 5e-46
gnl|LJGI|DN652393 60 2e-08
>gnl|LJGI|AV766688 similar to UniRef100_Q0PJC1 Cluster: MYB transcription factor
MYB122; n=1; Glycine max|Rep: MYB transcription factor
MYB122 - Glycine max (Soybean), partial (77%)
Length = 595
Score = 682 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Plus
Query: 29 attatctaaggccagacatcaaaagagggcatttcactcaagaagaagaagagatcatca 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attatctaaggccagacatcaaaagagggcatttcactcaagaagaagaagagatcatca 311
Query: 89 tcagaatgcacaaaaatctaggcaatagatggtctatcattgcggctgagttaccaggaa 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcagaatgcacaaaaatctaggcaatagatggtctatcattgcggctgagttaccaggaa 371
Query: 149 gaacagataatgaagtgaagaaccattggcacacctccctcaagaggagagttcaacaga 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gaacagataatgaagtgaagaaccattggcacacctccctcaagaggagagttcaacaga 431
Query: 209 atgaagaagccaaagtctcaaactcaaaaaatgaaggacccacttcagggaatggaattg 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgaagaagccaaagtctcaaactcaaaaaatgaaggacccacttcagggaatggaattg 491
Query: 269 gctcccttcaagttactcctccagcaacttctcaaatctcagacagcactggtgcactat 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gctcccttcaagttactcctccagcaacttctcaaatctcagacagcactggtgcactat 551
Query: 329 ctccattctcatcctctagcgagttctcttgcataagttcagat 372
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctccattctcatcctctagcgagttctcttgcataagttcagat 595
>gnl|LJGI|TC78235 homologue to UniRef100_Q4LDB1 Cluster: Protein recA; n=1;
Lactobacillus farciminis|Rep: Protein recA -
Lactobacillus farciminis, partial (6%)
Length = 409
Score = 498 bits (251), Expect = e-140
Identities = 254/255 (99%)
Strand = Plus / Plus
Query: 508 caagacactacccagattcttgatgcttgtgcattatctccgaatcaatcgtccagccaa 567
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 caagacactacccagattcttgatgcttgtgcattatctccgaatcaatcgtccagccca 60
Query: 568 agtttggctcttgataatgccttgggcaactttctggatgcaaacacagatccaacaatt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtttggctcttgataatgccttgggcaactttctggatgcaaacacagatccaacaatt 120
Query: 628 gataatttttggggacagccatatgttactgacacgtcctttgcggctgaatctgaatat 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gataatttttggggacagccatatgttactgacacgtcctttgcggctgaatctgaatat 180
Query: 688 ttttctataggatacgatgcagatctttggagtcaaagtgatttgtacgacgaacctttt 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttctataggatacgatgcagatctttggagtcaaagtgatttgtacgacgaacctttt 240
Query: 748 tgcttattctagtaa 762
|||||||||||||||
Sbjct: 241 tgcttattctagtaa 255
>gnl|LJGI|TC69448 similar to UniRef100_Q0PJC1 Cluster: MYB transcription factor
MYB122; n=1; Glycine max|Rep: MYB transcription factor
MYB122 - Glycine max (Soybean), partial (73%)
Length = 712
Score = 327 bits (165), Expect = 6e-89
Identities = 379/449 (84%), Gaps = 21/449 (4%)
Strand = Plus / Plus
Query: 29 attatctaaggccagacatcaaaagagggcatttcactcaagaagaagaagagatcatca 88
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 267 attatctaaggcctaacatcaaaagagggaatttcactcaagaagaagaagagatcatca 326
Query: 89 tcagaatgcacaaaaatctaggcaatagatggtctatcattgcggctgagttaccaggaa 148
|||||||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||
Sbjct: 327 tcagaatgcacaaaaagctaggcaatagatggtctaccatagcagctgagttaccaggaa 386
Query: 149 gaacagataatgaagtgaagaaccattggcacacctccctcaagaggagagttc---aac 205
||||||||| |||||| |||||||||||||||||| |||||||||| | |||| |||
Sbjct: 387 gaacagatagtgaagtcaagaaccattggcacaccaccctcaagagaactgttcatgaac 446
Query: 206 ag------------aatgaagaagccaaagtctcaaactcaaaaaat--gaaggacccac 251
|| ||||||||| ||||||||||||| ||||||||| || ||||||
Sbjct: 447 agaacactgtcacaaatgaagaaaccaaagtctcaaattcaaaaaatgagagggaccctg 506
Query: 252 ttcagggaa-tggaattggctcccttcaagttactcctccagcaacttctcaaatctcag 310
||| || |||||| | ||||||| |||||||||||| || | || ||||||||
Sbjct: 507 ttcccaaaagtggaatagcatcccttctggttactcctccaccagcaacttcaatctcag 566
Query: 311 acagcactggtgcactatctccattctcatcctctagcgagttctcttgcataagttcag 370
||||| |||||||||||| || |||||| |||||||||||||||| |||| || |||||
Sbjct: 567 gcagcattggtgcactatcccctttctcaacctctagcgagttctcatgcacaacttcag 626
Query: 371 atctgaatactacttcttccagcaatgaaaagttggtatttgaagatgattttgattttc 430
||||| |||||||||||||||| ||||| |||||| ||||||||||| ||||||||||
Sbjct: 627 atctg---actacttcttccagcagtgaaatgttggtgtttgaagatgactttgattttc 683
Query: 431 tggatgcatttgcagagcatgtcaatgaa 459
|||||| ||| ||||| |||||||||||
Sbjct: 684 tggatgattttacagagaatgtcaatgaa 712
>gnl|LJGI|BP077502
Length = 372
Score = 218 bits (110), Expect = 4e-56
Identities = 198/227 (87%), Gaps = 9/227 (3%)
Strand = Plus / Minus
Query: 541 ttatctccgaatcaatcgtccagccaaagtttggctcttgataatgccttgggcaacttt 600
|||||||| |||||||| || ||| | ||||||| ||||||||||| |||||||| |||
Sbjct: 372 ttatctcccaatcaatcatcaagcgacagtttggttcttgataatgacttgggcagtttt 313
Query: 601 ctggatgcaaacacagatccaacaattgataatttttggggacagccatatgttactgac 660
|| |||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||
Sbjct: 312 ctagatgcaaacacagacccaacaattgatgatttttggagacagccatatgttacagac 253
Query: 661 acgtcctttgcggctgaatctgaatatttttctataggatacgatgc------agatctt 714
|||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 252 acgtcctttgcggctgaatctgaatatttttctacagtatacgatgctgcagatgatctt 193
Query: 715 tggagtcaaagtgatttgtacgacg---aacctttttgcttattcta 758
|||||||||||| |||||||||| | ||| |||||||||||||||
Sbjct: 192 tggagtcaaagtaatttgtacgatgaacaacatttttgcttattcta 146
>gnl|LJGI|TC75727 similar to UniRef100_Q0PJC1 Cluster: MYB transcription factor
MYB122; n=1; Glycine max|Rep: MYB transcription factor
MYB122 - Glycine max (Soybean), partial (72%)
Length = 1301
Score = 184 bits (93), Expect = 5e-46
Identities = 307/377 (81%), Gaps = 21/377 (5%)
Strand = Plus / Plus
Query: 115 agatggtctatcattgcggctgagttaccaggaagaacagataatgaagtgaagaaccat 174
|||||||||| ||| || ||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 604 agatggtctaccatagcagctgagttaccaggaagaacagatagtgaagtcaagaaccat 663
Query: 175 tggcacacctccctcaagaggagagttca---acagaa------------tgaagaagcc 219
||||||||| |||||||||| | ||||| |||||| ||||||| ||
Sbjct: 664 tggcacaccaccctcaagagaactgttcatgaacagaacactgtcacaaatgaagaaacc 723
Query: 220 aaagtctcaaactcaaaaaatgaa--ggacccacttcagggaa-tggaattggctccctt 276
||||||||||| ||||||||||| |||||| ||| || |||||| | ||||||
Sbjct: 724 aaagtctcaaattcaaaaaatgagagggaccctgttcccaaaagtggaatagcatccctt 783
Query: 277 caagttactcctccagcaacttctcaaatctcagacagcactggtgcactatctccattc 336
| |||||||||||| || | || |||||||| ||||| |||||||||||| || |||
Sbjct: 784 ctggttactcctccaccagcaacttcaatctcaggcagcattggtgcactatcccctttc 843
Query: 337 tcatcctctagcgagttctcttgcataagttcagatctgaatactacttcttccagcaat 396
||| ||||||| ||||| || |||| || ||||||||||| |||||||||| |||| |
Sbjct: 844 tcaacctctagggagttttcatgcacaacttcagatctga---ctacttcttctagcagt 900
Query: 397 gaaaagttggtatttgaagatgattttgattttctggatgcatttgcagagcatgtcaat 456
|||| |||||| ||||||||||| |||||||||||||||| ||| ||||| ||||||||
Sbjct: 901 gaaatgttggtgtttgaagatgactttgattttctggatgattttacagagaatgtcaat 960
Query: 457 gaaaagttctggtcaga 473
||||| |||||||||||
Sbjct: 961 gaaaatttctggtcaga 977
Score = 147 bits (74), Expect = 1e-34
Identities = 182/218 (83%)
Strand = Plus / Plus
Query: 470 cagagcttcaaattgatgctaatggtgctcttcaaaatcaagacactacccagattcttg 529
||||||| |||||||| ||||| |||||||||||||||||||| || |||||| ||||
Sbjct: 1022 cagagctgcaaattgagactaattgtgctcttcaaaatcaagacgatatccagatccttg 1081
Query: 530 atgcttgtgcattatctccgaatcaatcgtccagccaaagtttggctcttgataatgcct 589
||||||||| ||| ||||| ||||| || || ||| ||| |||| ||||| | || ||
Sbjct: 1082 atgcttgtgaattgtctcccaatcagtcctcaagcgaaaatttgatccttgagagtgact 1141
Query: 590 tgggcaactttctggatgcaaacacagatccaacaattgataatttttggggacagccat 649
| ||| ||||||||||| ||||||||| | |||| |||||||||| |||||||| ||||
Sbjct: 1142 ttggctgctttctggatgaaaacacagaccgaacacttgataatttctggggacaaccat 1201
Query: 650 atgttactgacacgtcctttgcggctgaatctgaatat 687
|||||||||||| |||||||| | ||| |||||||||
Sbjct: 1202 atgttactgacatgtcctttgtgcgtgagtctgaatat 1239
Score = 115 bits (58), Expect = 4e-25
Identities = 81/88 (92%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 29 attatctaaggccagacatcaaaagagggcatttcactcaagaagaagaagagatcatca 88
||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 402 attatctaaggcctaacatcaaaagagggaatttcactcaaga---agaagagatcatca 458
Query: 89 tcagaatgcacaaaaatctaggcaatag 116
|||||||||||||||| |||||||||||
Sbjct: 459 tcagaatgcacaaaaagctaggcaatag 486
>gnl|LJGI|DN652393
Length = 145
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 271 tcccttcaagttactcctccagcaacttctcaaatctcagacagcactggtgcactatct 330
||||| ||||||||| ||||| |||||| ||| ||||||||||||| ||| ||||| |
Sbjct: 83 tccctacaagttacttttccagaaacttcccaattctcagacagcacgggttcactaccc 24
Query: 331 ccattctcatcctc 344
|| |||||||||||
Sbjct: 23 cccttctcatcctc 10