Miyakogusa Predicted Gene
- Lj0g3v0160789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0160789.1 tr|G7KFP7|G7KFP7_MEDTR DNA-binding protein
SMUBP-2 OS=Medicago truncatula GN=MTR_5g076380 PE=4
SV=1,76.7,0,AAA_12,NULL; AAA_11,NULL; SUBFAMILY NOT NAMED,NULL;
DNA2/NAM7 HELICASE FAMILY,NULL; no description,N,CUFF.9977.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76384 weakly similar to UniRef100_A7QTT0 Cluster: Chr... 476 e-133
gnl|LJGI|TC75827 weakly similar to UniRef100_A7QTT1 Cluster: Chr... 109 3e-23
gnl|LJGI|TC69623 weakly similar to UniRef100_Q9SHX6 Cluster: F1E... 86 5e-16
>gnl|LJGI|TC76384 weakly similar to UniRef100_A7QTT0 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(28%)
Length = 1457
Score = 476 bits (240), Expect = e-133
Identities = 743/913 (81%)
Strand = Plus / Plus
Query: 11 tgcaatttttagtaattgatgaggcagcaatgctaaaagaatgtgaatcaacaattccat 70
|||||||| ||||| ||||||| ||||| |||| ||||||||||| || |||||||
Sbjct: 276 tgcaatttctagtagttgatgaagcagctcaattaaaggaatgtgaatcgaccattccat 335
Query: 71 tacagctgcgaggtattcgccattgcatcctaataggtgatgagagacaacttcctgcat 130
| ||||| | |||| | | |||||||||||||||||||||||||| ||| ||||| ||||
Sbjct: 336 tgcagcttccaggtctccaccattgcatcctaataggtgatgagaaacagcttccagcat 395
Query: 131 tggtcaaaagcaagattgcagatgaagctgaatttggcagaagtttgtttgagaggcttg 190
|||| ||||||| || ||||||| | ||||||||||| |||||||||||||| ||| | |
Sbjct: 396 tggttaaaagcaggactgcagataatgctgaatttggaagaagtttgtttgaaaggttgg 455
Query: 191 caattttaggatacaagaagcatatgcttgatgttcagtatagaatgcatccaacaatta 250
| ||||| |||||||||||||||||| ||||||||||| | |||||||| | ||||
Sbjct: 456 tgctcttaggttacaagaagcatatgcttaatgttcagtatcgggtgcatccatccatta 515
Query: 251 gctcatttccatgcaaagagttctatgatgaaaatctatttgatgccccctttgtcaggg 310
||| ||| |||||||||||||| ||||||||||| || |||||||||| ||||| ||
Sbjct: 516 gcttattcccatgcaaagagttttatgatgaaaaacttactgatgcccccactgtcaagg 575
Query: 311 aaggaagctataacaaacgtttccttgaaggacaaatgtatgcttcttattctttcataa 370
|| ||||||||| | | ||||||||||||| |||||| || |||||||||||| ||
Sbjct: 576 gagaaagctataatagaagtttccttgaaggtgaaatgtttggttcttattcttttatcc 635
Query: 371 acattgctcaaggtaaagagcaattcggccctgaacacagtttgatgaacaagatagaag 430
| || || | || || || || || || | ||| |||||||||| |||| || | ||||
Sbjct: 636 atatagcaaaggggaaggaacagtttggtcgtgagcacagtttgaagaaccaggttgaag 695
Query: 431 ctgctgttatttctgagataattggaagtcttaaaaaagagtttatgaggacagggaaga 490
|||| ||||||||||||||||||||||| | ||||||| ||||||||||||| ||||||
Sbjct: 696 ctgcagttatttctgagataattggaagccataaaaaatagtttatgaggactaggaaga 755
Query: 491 aagttagcataggaatcatatctccatacaatgctcaagttaatgaaatcaaggagaaaa 550
|| ||| ||| ||||| |||||||| || ||| |||||||| |||||||| | ||||||
Sbjct: 756 aaattaacattggaattatatctccctataattctcaagtttatgaaatccaacagaaaa 815
Query: 551 ttaagcactacatatcggtttctgatcctaacttctttgttagcgttcgttctgttgatg 610
|||||||| |||| || |||||||||||| |||||| ||| || |||||||| |||||||
Sbjct: 816 ttaagcaccacatttcagtttctgatcctgacttctctgtcagtgttcgttcggttgatg 875
Query: 611 gttttcaaggcggtgaagaagatattataataatgtcaactgtgagatctaatgtnnnnn 670
| ||| |||| || ||| | ||| |||||||||| || |||||||||||||||
Sbjct: 876 gatttaaaggaggggaacaggatgttataataatttctactgtgagatctaatcctagtg 935
Query: 671 nnaaagtgggttttctttccaatagacaaagaacaaatgtggccatcactagggctagat 730
|||||||| ||||||||||||||||||||| ||||||| || || |||||||||||||
Sbjct: 936 gaaaagtggggtttctttccaatagacaaagagcaaatgttgctatgactagggctagat 995
Query: 731 attgcctttggatactaggaaatgcattcactttaatcaaaagtgactctgtgtggagga 790
|| ||||||||||| |||||||||| || | | | |||||| | ||||||| |
Sbjct: 996 atagcctttggatattaggaaatgcggcaacactggttagcagtgacacagtgtggaagc 1055
Query: 791 aggtagtccttgatgctaagagaagagactgtttctataatgcagatgaggacaagaaat 850
||||||| ||||||||||||| |||||| |||||| ||| || ||| ||||||| |||
Sbjct: 1056 aggtagttcttgatgctaagaaaagagattgtttccatacagccgataaggacaataaac 1115
Query: 851 tggctcagactattgaggattctttgtatgggcttgacctacttgaagaaactcagtcaa 910
|||||| | |||||||||| | | | || |||| | |||||||||||| || |||| |
Sbjct: 1116 tggctcgggttattgaggatgttgtttttgagcttcaactacttgaagaatctgagtcga 1175
Query: 911 catttaagaaact 923
|||||||||||
Sbjct: 1176 tgtttaagaaact 1188
>gnl|LJGI|TC75827 weakly similar to UniRef100_A7QTT1 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 595
Score = 109 bits (55), Expect = 3e-23
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 673 aaagtgggttttctttccaatagacaaagaacaaatgtggccatcactagggctagatat 732
|||||||| ||||||||||||||||||||| ||||||| || || |||||||||||||||
Sbjct: 8 aaagtggggtttctttccaatagacaaagagcaaatgttgctatgactagggctagatat 67
Query: 733 tgcctttggatactaggaaatgcattcactttaatcaaaagtgactctgtgtggaggaag 792
||||||||||| |||||||||| || | | | |||||| | ||||||| | ||
Sbjct: 68 ggcctttggatattaggaaatgcggcaacactggttagcagtgacacagtgtggaagcag 127
Query: 793 gtagtccttgatgctaagagaagagactgtttctataatgcagatgaggacaagaaattg 852
||||| ||||||||||||| |||||| |||||| ||| || ||| ||||||| || ||
Sbjct: 128 gtagttcttgatgctaagaaaagagattgtttccatacagccgataaggacaatcaactg 187
Query: 853 gctcagactattgaggattctttgtatgggcttgacctacttgaagaaactcagtcaaca 912
|||| | |||||||||| | | | || |||| | |||||||||||| || |||| |
Sbjct: 188 gctcgggttattgaggatgttgtttttgagcttcaactacttgaagaatctgagtcgatg 247
Query: 913 tttaagaaact 923
|||||||||||
Sbjct: 248 tttaagaaact 258
>gnl|LJGI|TC69623 weakly similar to UniRef100_Q9SHX6 Cluster: F1E22.16; n=1;
Arabidopsis thaliana|Rep: F1E22.16 - Arabidopsis
thaliana (Mouse-ear cress), partial (4%)
Length = 905
Score = 85.7 bits (43), Expect = 5e-16
Identities = 103/123 (83%)
Strand = Plus / Minus
Query: 727 agatattgcctttggatactaggaaatgcattcactttaatcaaaagtgactctgtgtgg 786
|||||||||||||||||| ||||||||||| || || |||| |||||||| ||||||
Sbjct: 324 agatattgcctttggatattaggaaatgcagcaacattgatcagcagtgactcagtgtgg 265
Query: 787 aggaaggtagtccttgatgctaagagaagagactgtttctataatgcagatgaggacaag 846
|| ||| || ||||||||||||| |||||| |||||| ||| || ||||||||||||
Sbjct: 264 agacgggttgttcttgatgctaagaaaagagattgtttccatacagctgatgaggacaag 205
Query: 847 aaa 849
|||
Sbjct: 204 aaa 202