Miyakogusa Predicted Gene

Lj0g3v0160579.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0160579.1 tr|G7J534|G7J534_MEDTR Kinesin-like protein
OS=Medicago truncatula GN=MTR_3g100270 PE=3 SV=1,86.65,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
KINESIN_MOTOR_DOMAIN2,Kinesin, motor doma,CUFF.9962.1
         (1644 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011343 similar to UniRef100_UPI000065EAFB Cluster: Li...    66   7e-10
gnl|LJGI|TC64754 weakly similar to UniRef100_A7NUM1 Cluster: Chr...    60   5e-08

>gnl|LJGI|GO011343 similar to UniRef100_UPI000065EAFB Cluster: Ligand-dependent
            corepressor (LCoR) (Mblk1-related protein 2).; n=1;
            Takifugu rubripes|Rep: Ligand-dependent corepressor
            (LCoR) (Mblk1-related protein 2). - Takifugu rubripes,
            partial (4%)
          Length = 630

 Score = 65.9 bits (33), Expect = 7e-10
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 1559 tattgcaaaggaagacagaagaagcttcgttggccacaaaa 1599
            |||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 160  tatttcaacggaagacagaagaagcttcgttggccacaaaa 120



 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 1517 agatgcataagctgttagcattgaatcagcggcaaaagat 1556
            ||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 279  agatgcataagttgttaccattgaatcagcagcaaaagat 240


>gnl|LJGI|TC64754 weakly similar to UniRef100_A7NUM1 Cluster: Chromosome chr18
            scaffold_1, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (68%)
          Length = 766

 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                  
Query: 1474 gaagttctccagcttaagaaagaggggagaaggaatga 1511
            |||||||| ||||||||||||||||| |||||||||||
Sbjct: 454  gaagttcttcagcttaagaaagagggaagaaggaatga 491