Miyakogusa Predicted Gene

Lj0g3v0160319.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0160319.1 tr|F4JHD4|F4JHD4_ARATH Myb domain protein 3r2
OS=Arabidopsis thaliana GN=MYB3R2 PE=4 SV=1,46.07,0.0000000000002,no
description,Homeodomain-like; Homeodomain-like,Homeodomain-like;
HTH_MYB,Myb domain; SUBFAMILY NO,CUFF.9945.1
         (423 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71216 similar to UniRef100_Q0IP78 Cluster: Os12g02380...   839   0.0  

>gnl|LJGI|TC71216 similar to UniRef100_Q0IP78 Cluster: Os12g0238000 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os12g0238000 protein -
           Oryza sativa subsp. japonica (Rice), partial (14%)
          Length = 816

 Score =  839 bits (423), Expect = 0.0
 Identities = 423/423 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaacatgttatagaacaaggtggtgatgctggtatgaaaatggaaactctggtttcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atggaacatgttatagaacaaggtggtgatgctggtatgaaaatggaaactctggtttcg 271

                                                                       
Query: 61  agttttccggaatctgaaagcagagttgatcgaggaacttactacaaacctgtttctttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agttttccggaatctgaaagcagagttgatcgaggaacttactacaaacctgtttctttt 331

                                                                       
Query: 121 ccaggaagggtgactggtcctacaagacgatcaacaaaaggaggctggaccgagcaggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccaggaagggtgactggtcctacaagacgatcaacaaaaggaggctggaccgagcaggag 391

                                                                       
Query: 181 gacaaacttttgacttctgctgtgaaagcgttcaatggaaaaaattggagaaagatagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gacaaacttttgacttctgctgtgaaagcgttcaatggaaaaaattggagaaagatagct 451

                                                                       
Query: 241 gcatgtgtgccagggagaacagatgtccaatgcctgcatcgttggcagaaggttctcaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gcatgtgtgccagggagaacagatgtccaatgcctgcatcgttggcagaaggttctcaat 511

                                                                       
Query: 301 cctgaacttattaaaggaccttggacaaaagaggaagatgatctaatacgtgagcttgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cctgaacttattaaaggaccttggacaaaagaggaagatgatctaatacgtgagcttgtc 571

                                                                       
Query: 361 atgacgaatgggaaaaagaactggtctgaaatagcgaaggccttgcctggtcggataggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atgacgaatgggaaaaagaactggtctgaaatagcgaaggccttgcctggtcggataggg 631

              
Query: 421 aag 423
           |||
Sbjct: 632 aag 634