Miyakogusa Predicted Gene
- Lj0g3v0160149.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0160149.1 tr|G7JLT0|G7JLT0_MEDTR Disease resistance protein
OS=Medicago truncatula GN=MTR_4g014570 PE=4 SV=1,71.77,0,L
domain-like,NULL; "Winged helix" DNA-binding domain,NULL; no
description,NULL; seg,NULL; DISEASE R,CUFF.10105.1
(1890 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TI... 914 0.0
gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 728 0.0
gnl|LJGI|TC73352 206 4e-52
gnl|LJGI|BP058038 151 2e-35
gnl|LJGI|BP073543 133 4e-30
gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 101 2e-20
gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 101 2e-20
gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;... 98 2e-19
gnl|LJGI|TC81057 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA A... 94 4e-18
gnl|LJGI|DC598457 weakly similar to UniRef100_A7PQ89 Cluster: Ch... 58 2e-07
gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 58 2e-07
>gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
truncatula (Barrel medic), partial (11%)
Length = 581
Score = 914 bits (461), Expect = 0.0
Identities = 561/596 (94%), Gaps = 15/596 (2%)
Strand = Plus / Plus
Query: 1192 gcaactacatcagaagtatcaaatatgaaaacttcttccttgatggaatgcagttgtcaa 1251
||||||||||||||| ||||||||| | |||||||| ||||||| ||||||||||||||
Sbjct: 1 gcaactacatcagaaatatcaaataaggaaacttctggcttgatgcaatgcagttgtcaa 60
Query: 1252 gtgcttgattcaggatcaaaaggttccttgaaatctcttttatttcaaatgggaatgaat 1311
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcttgattcaggatcaaaagattccttgaaatctcttttatttcaaatgggaatgaat 120
Query: 1312 tgtcaagccaccagtattctgaaagagagcattttagagaatatggctgttggagggtct 1371
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 tgccaagccaccagtattctgaaagagagcattttagagaatatggctgttagagggtct 180
Query: 1372 ggtgtaagcttgctccccggagacaattatccagattggtcaaccttcaactcggaaggt 1431
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggt------ttgctccccggagacaattatccagattggtcaaccttcaactcggaaggt 234
Query: 1432 tgttctgtgatttttgaagtccctcaagtgaatgggcgtagtttgaagacaatgatgtgt 1491
|||||||||||||||||||||||||||||||| ||||| |||||||||||||| || |||
Sbjct: 235 tgttctgtgatttttgaagtccctcaagtgaacgggcgcagtttgaagacaataatttgt 294
Query: 1492 gttgtccattcttctaccgcagatgacataacatcagatggccttcaaaatgtgttggtg 1551
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gttgtccattcttctaccacagatgacataacatcagatggccttcaaaatgtgttggtg 354
Query: 1552 ataaattgcacaaagaacacaattcagctctataagaggaacgcattagcctcctttgaa 1611
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 355 ataaattgcacaaagaacacaattcagctctataagaggaatgcattagcctcctttgaa 414
Query: 1612 gatgaagagtggcagagagtagtatcaaatattgaaccaggtaacaaagtaaaggtggtg 1671
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 415 gatgaagagtggcagagagtagtatcaaatattgaaccgggtaacaaagtaaagatggtg 474
Query: 1672 gttgtttttgagaacggattcactgtgaagaagacaacagtatatcttgtatataatgaa 1731
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 475 gttgtttttgagaacggattcactgtgaagaagacaacagtttatcttgtatatgatgaa 534
Query: 1732 ccaattgaggagaaaatggaaccttgcagtgcaccatataagaatgaaattgtttt 1787
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 535 ---------gagaaaatggaaccttgcaatgcaccatataagaatgaaattgtttt 581
>gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (5%)
Length = 575
Score = 728 bits (367), Expect = 0.0
Identities = 523/575 (90%)
Strand = Plus / Plus
Query: 896 ctttgtgtggtcatgaaggattctctcatgatgtgtttccttctatcatttggtcttgga 955
||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtgcggccatgaaggattctcacgtgatgtgtttccttctatcatttggtcttgga 60
Query: 956 tgtcaccaacaaatatcctctcatccttagttcaaacatctgcaggcatgtcatctctgg 1015
||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |
Sbjct: 61 tgtcaccaacaaataacctctcatccttagttcaaacatatacaggcatgtcatctcttg 120
Query: 1016 tttctttaaatgtatcaaatagtagttcacagggattatcatctattcccatggaccttc 1075
|||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 121 tttctttaaacgtatcaaatagtagttctgagggagtatcatctattcccgtggaccttc 180
Query: 1076 caaagcttcaaagtctgtggatagagtctggctcagaacttcaactttctcaagatgcag 1135
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 181 caaagcttcaaagtctgtggatagagtctggctcagaacttcaactttctcgagatgcgg 240
Query: 1136 aaagaattttggatgccttgtatgccatgaattcttctaaagaattggaaccaactgcaa 1195
||||||||||||||||||| ||||| | ||||| |||||| | ||| || ||||||||
Sbjct: 241 aaagaattttggatgccttatatgctacaaattcctctaaaaatttgcaattaactgcaa 300
Query: 1196 ctacatcagaagtatcaaatatgaaaacttcttccttgatggaatgcagttgtcaagtgc 1255
|||||||| |||||||||||||| ||||| || | |||||||||||||| ||||||||||
Sbjct: 301 ctacatcaaaagtatcaaatatggaaactactgcgttgatggaatgcagctgtcaagtgc 360
Query: 1256 ttgattcaggatcaaaaggttccttgaaatctcttttatttcaaatgggaatgaattgtc 1315
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 361 atgattcaggatcaaaaggttccctgaaatttcttttatttcaaatgggaatgaattgtc 420
Query: 1316 aagccaccagtattctgaaagagagcattttagagaatatggctgttggagggtctggtg 1375
|||||||||||||||||||||||||||||| |||| |||||||| |||| ||||||
Sbjct: 421 ttgccaccagtattctgaaagagagcattttacagaaaatggctgtgagaggaactggtg 480
Query: 1376 taagcttgctccccggagacaattatccagattggtcaaccttcaactcggaaggttgtt 1435
| ||||||||||||||||||||||||||||| |||| || |||||| | ||||||| ||
Sbjct: 481 ttagcttgctccccggagacaattatccagactggttaaacttcaattgcgaaggttctt 540
Query: 1436 ctgtgatttttgaagtccctcaagtgaatgggcgt 1470
|||| ||||||||||||||| ||||||||||||||
Sbjct: 541 ctgtaatttttgaagtccctgaagtgaatgggcgt 575
>gnl|LJGI|TC73352
Length = 672
Score = 206 bits (104), Expect = 4e-52
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 1727 atgaaccaattgaggagaaaatggaaccttgcagtgcaccatataagaatgaaattgttt 1786
||||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 atgaaccaattagggaggaagtggaaccttgcaatgcaccatataagaatgaaattgttt 62
Query: 1787 ttgggggtgatgaaactgaatccgctgtcgggaggagctctgcacaactggagtcagtgg 1846
|||| |||||||||| |||||| |||||| |||||||||||| ||| ||||||||||||
Sbjct: 63 ttggtggtgatgaaattgaatctgctgtcaggaggagctctgttcaagtggagtcagtgg 122
Query: 1847 atgacttgaaacaaaaactgaagagaaggaagttgcaataaaag 1890
|||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 123 atgacttgaaacaaaaacagaagagaaggaaattccaataaaag 166
>gnl|LJGI|BP058038
Length = 552
Score = 151 bits (76), Expect = 2e-35
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 1815 cgggaggagctctgcacaactggagtcagtggatgacttgaaacaaaaactgaagagaag 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cgggaggagctctgcacaactggagtcagtggatgacttgaaacaaaaactgaagagaag 493
Query: 1875 gaagttgcaataaaag 1890
||||||||||||||||
Sbjct: 492 gaagttgcaataaaag 477
>gnl|LJGI|BP073543
Length = 395
Score = 133 bits (67), Expect = 4e-30
Identities = 148/175 (84%)
Strand = Plus / Minus
Query: 1688 gattcactgtgaagaagacaacagtatatcttgtatataatgaaccaattgaggagaaaa 1747
||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||||
Sbjct: 393 gattcactgtgaagaagacaacaatttatcttatatatgttgaaccaattgaggagaaaa 334
Query: 1748 tggaaccttgcagtgcaccatataagaatgaaattgtttttgggggtgatgaaactgaat 1807
||||| ||||| |||||||| ||||||||| ||||||| | | ||| |||||| |||||
Sbjct: 333 tggaatattgcaatgcaccatgtaagaatgagattgtttctagtggtaatgaaattgaat 274
Query: 1808 ccgctgtcgggaggagctctgcacaactggagtcagtggatgacttgaaacaaaa 1862
| | ||| ||||||||||||| || |||| ||| |||||||| ||||||||
Sbjct: 273 cagatgtttggaggagctctgctcacgtggaatcaaaggatgactgcaaacaaaa 219
>gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (16%)
Length = 710
Score = 101 bits (51), Expect = 2e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 308 aagcatttgagaagatgaagaaactcagattgcttcaacttgctggtgtaaagcttgaag 367
||||||||| ||||||| | ||||| |||||||||||||||||||| | | | ||||| |
Sbjct: 512 aagcatttgggaagatggataaacttagattgcttcaacttgctggcgcacaacttgatg 571
Query: 368 gagattttaaatatctttcaagaaatctgagatggctgtgttggcatggatttcc 422
|||||| ||| |||||||||||| |||| |||||||| || |||||| |||||||
Sbjct: 572 gagattataagtatctttcaagagatcttagatggctttgctggcatagatttcc 626
Score = 89.7 bits (45), Expect = 6e-17
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 45 ttttgcagaaattggaataagtgtccttgttgagagaagtcttgtaactgttgatgataa 104
||||||||||||||||||||||||||| || | | | ||||||||| ||||| ||
Sbjct: 246 ttttgcagaaattggaataagtgtcctcgtacaacaatgccttgtaactattgataggaa 305
Query: 105 gaacaagcttggaatgcatgatttgctgcgagacatgggaagaga 149
||||||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 306 gaacaagatcggaatgcatgatttgctacgagacatgggaagaga 350
>gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (11%)
Length = 680
Score = 101 bits (51), Expect = 2e-20
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 308 aagcatttgagaagatgaagaaactcagattgcttcaacttgctggtgtaaagcttgaag 367
||||||||| ||||||| | ||||| |||||||||||||||||||| | | | ||||| |
Sbjct: 428 aagcatttgggaagatggataaacttagattgcttcaacttgctggcgcacaacttgatg 487
Query: 368 gagattttaaatatctttcaagaaatctgagatggctgtgttggcatggatttcc 422
|||||| ||| |||||||||||| |||| |||||||| || |||||| |||||||
Sbjct: 488 gagattataagtatctttcaagagatcttagatggctttgctggcatagatttcc 542
Score = 73.8 bits (37), Expect = 4e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 85 cttgtaactgttgatgataagaacaagcttggaatgcatgatttgctgcgagacatggga 144
||||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||
Sbjct: 202 cttgtaactattgataggaagaacaagatcggaatgcatgatttgctacgagacatggga 261
Query: 145 agaga 149
|||||
Sbjct: 262 agaga 266
>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (16%)
Length = 590
Score = 97.6 bits (49), Expect = 2e-19
Identities = 190/237 (80%)
Strand = Plus / Plus
Query: 731 agttgaaatctctgaaaaccctcatcctttctggatgtttaatgattgacaagttggaag 790
||||||||||| ||| ||| ||||||||||| || |||| || ||||| ||||||||||
Sbjct: 12 agttgaaatctttgacaactctcatcctttcaggttgttcaaaaattgataagttggaag 71
Query: 791 aggacgtggaacagatggaatctttgacaaccctgattgcagacaacactgctataacaa 850
| || | | ||||||||||| |||||||| || |||||| | | || |||||||
Sbjct: 72 aagatatagtgcagatggaatccttgacaacacttattgcaaaagatacagctataaagg 131
Query: 851 gagttccctattcattagtcaggtcaaaaagcatcggatatatttctttgtgtggtcatg 910
||||||||||||| || | || | |||||||| |||||||| || || ||||| |||
Sbjct: 132 aagttccctattcaatactaagattgaaaagcataggatatatatccttatgtggatatg 191
Query: 911 aaggattctctcatgatgtgtttccttctatcatttggtcttggatgtcaccaacaa 967
||||||| | | |||||| ||||||||| ||||| |||||||||||||||| ||||
Sbjct: 192 aaggattaacacgtgatgtttttccttctctcattcggtcttggatgtcacccacaa 248
>gnl|LJGI|TC81057 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (8%)
Length = 1044
Score = 93.7 bits (47), Expect = 4e-18
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 308 aagcatttgagaagatgaagaaactcagattgcttcaacttgctggtgtaaagcttgaag 367
||||||||||||||||| | ||||| ||||||||||||||| |||| || || |||| |
Sbjct: 687 aagcatttgagaagatggataaacttagattgcttcaacttactggcgtgaaaattgatg 746
Query: 368 gagattttaaatatctttcaagaaatctgagatggctgtgttggcat 414
|||||| ||| |||||||||||| |||| |||||||| || ||||||
Sbjct: 747 gagattataagtatctttcaagagatcttagatggctttgctggcat 793
>gnl|LJGI|DC598457 weakly similar to UniRef100_A7PQ89 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 570
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 106 aacaagcttggaatgcatgatttgctgcgagacatgggaagagaa 150
|||||||||| ||||||||||||| ||| ||| ||||||||||||
Sbjct: 210 aacaagcttgaaatgcatgatttggtgcaagagatgggaagagaa 254
>gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (11%)
Length = 567
Score = 58.0 bits (29), Expect = 2e-07
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 45 ttttgcagaaattggaataagtgtccttgttgagagaagtcttgtaactgttgatgataa 104
||||||||||||||||||||||||||| || | | | ||| ||||| ||||| ||
Sbjct: 436 ttttgcagaaattggaataagtgtcctcgtacaacaatgccttataactattgataggaa 495
Query: 105 gaacaagcttggaatgcatgatttgctgcgagacatgggaagagaaatc 153
||||| | | |||||||||||||||| | ||||||||||| |||||||
Sbjct: 496 gaacaggatcagaatgcatgatttgctactagacatgggaaaagaaatc 544