Miyakogusa Predicted Gene
- Lj0g3v0159929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0159929.1 tr|A9SFM5|A9SFM5_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,40.68,0.000000000000009, ,CUFF.9919.1
(396 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76904 similar to UniRef100_A9SFM5 Cluster: Predicted ... 664 0.0
gnl|LJGI|BP066916 similar to UniRef100_A7NW67 Cluster: Chromosom... 78 5e-14
gnl|LJGI|TC73410 similar to UniRef100_A3S8V8 Cluster: Sulfate/tu... 70 1e-11
gnl|LJGI|TC75696 similar to UniRef100_A7R179 Cluster: Chromosome... 64 7e-10
gnl|LJGI|TC67102 similar to UniRef100_A7R179 Cluster: Chromosome... 64 7e-10
>gnl|LJGI|TC76904 similar to UniRef100_A9SFM5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(12%)
Length = 1019
Score = 664 bits (335), Expect = 0.0
Identities = 342/343 (99%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 atgaaactgagggttgtctgcaggaaactttacgactatgtacgctatgatctcaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atgaaactgagggttgtctgcaggaaactttacgactatgtacgctatgatctcaaagaa 367
Query: 61 attgcttttccttcatctttgcctgaccctcctgacatgaaaaagcgcctgaaattgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 attgcttttccttcatctttgcctgaccctcctgacatgaaaaagcgcctgaaattgagc 427
Query: 121 tgggaggagcgtatatgggtttt-gaagagggctgctaggctttatgctgctagctgggt 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgggaggagcgtatatgggtttttgaagagggctgctaggctttatgctgctagctgggt 487
Query: 180 tcgtgacattggtcctgatcttcggccagatgattataagaacgatgatatgactgatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcgtgacattggtcctgatcttcggccagatgattataagaacgatgatatgactgatga 547
Query: 240 accaaatggtgataaggaaacaactaaaggaaaagaaccctcaacactggaggatcttgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 accaaatggtgataaggaaacaactaaaggaaaagaaccctcaacactggaggatcttgc 607
Query: 300 tgtagctgccagagggggaatggagactctaagacctgctttg 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tgtagctgccagagggggaatggagactctaagacctgctttg 650
Score = 109 bits (55), Expect = 1e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 342 ggtaccaagagggtgttcagcaagtaatggagaagatagaagattccaaatctaa 396
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ggtaccaagagggtgttcagcaagtaatggagaagatagaagattccaaatctaa 766
>gnl|LJGI|BP066916 similar to UniRef100_A7NW67 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 529
Score = 77.8 bits (39), Expect = 5e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 342 ggtaccaagagggtgttcagcaagtaatggagaagatagaagattcc 388
||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 277 ggtaccaagagggtgttcagcgagtaatggagaagaaagaagattcc 231
>gnl|LJGI|TC73410 similar to UniRef100_A3S8V8 Cluster: Sulfate/tungstate uptake
family protein ABC transporter, permease protein; n=2;
Sulfitobacter|Rep: Sulfate/tungstate uptake family
protein ABC transporter, permease protein -
Sulfitobacter sp. EE-36, partial (7%)
Length = 542
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 342 ggtaccaagagggtgttcagcaagtaatggagaagatagaagattcc 388
|||||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct: 267 ggtacccagagggtgttcagcgagtaatggagaagaaagaagattcc 313
>gnl|LJGI|TC75696 similar to UniRef100_A7R179 Cluster: Chromosome undetermined
scaffold_340, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_340,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 582
Score = 63.9 bits (32), Expect = 7e-10
Identities = 46/50 (92%), Gaps = 3/50 (6%)
Strand = Plus / Plus
Query: 342 ggtaccaagagggtgttcagcaagtaatggagaagatagaagattccaaa 391
|||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 293 ggtaccaagagggtgttcagcaagtaat---gaagaaagaagattccaaa 339
>gnl|LJGI|TC67102 similar to UniRef100_A7R179 Cluster: Chromosome undetermined
scaffold_340, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_340,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (4%)
Length = 867
Score = 63.9 bits (32), Expect = 7e-10
Identities = 46/50 (92%), Gaps = 3/50 (6%)
Strand = Plus / Plus
Query: 342 ggtaccaagagggtgttcagcaagtaatggagaagatagaagattccaaa 391
|||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 591 ggtaccaagagggtgttcagcaagtaat---gaagaaagaagattccaaa 637